KEGG   Sinorhizobium fredii NGR234: NGR_c01330
Entry
NGR_c01330        CDS       T00888                                 
Name
(GenBank) putative restriction endonuclease type I with R subunit / type III with Res subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
rhi  Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:rhi02048]
    NGR_c01330
Enzymes [BR:rhi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     NGR_c01330
Prokaryotic defense system [BR:rhi02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   NGR_c01330
SSDB
Motif
Pfam: T1RK_2nd EcoEI_R_C ResIII SWI2_SNF2 DEAD DUF4145 Helicase_C SLFN-g3_helicase HSDR_N CEP131_C UvrD-helicase
Other DBs
NCBI-ProteinID: ACP23936
UniProt: C3MF99
LinkDB
Position
143676..147098
AA seq 1140 aa
MGGALSVNFDHLKSLSPELQRLGTLAERFFADDANTSLIKSRQFGEYMVKEIAALSGVYD
PAARETTHDLLRRLATQQILPREVADIFHAVRKSGNEATHNLAGSPTEALAALKFCRALG
VWYRRTYGRDPNFRPGPFVPPKASADIDQATQAELATLRRQVREAEAQLAAAHSSADELA
KARAAADELARQAAADNAVWEQTAVEMEANQAELSRKLAELQKAAQAQPQQLQMEFKQAG
LQAASRLELDERQTRRLIDAQLVDAGWEADSDRLSYQLGARPEEGRNLAIAEWPAAGGRA
DYGLFIGLTCVGIIEAKRESVDVPSTLQQAERYARTIALPPENSHPGGLWNHGLADPFRV
PFVFTTNGRPFVRQWQTKSGIWFCDLRRDTNHPRPLTTWFSPKDLLDILATDLDAAAQGL
AEDSFGKGRMRPYQEDAIAAIENAVVAGQRDILVSMATGTGKTRTSIALMYRLLKHKRFR
RILFLVDRKALGKQTSDALETTEIEGMLNFAQIYKVAGLEKKVPEDEDQVQVATVQSLIA
RILNEPDPAKRPTPGTFDCIIVDEAHRGYTLDAELRESDVGFRNLDDYQSAYRQILDYFD
AVKVALTATPALHTREIFGHPVFHYGYRQAVVEGYLNDHLPPKRITTALSEAGIHFEGGE
EVEIIDRTTGQIDLFELPDEVSLDYDVADFNKRVYSEAFNRMVCRAIATEIPPSKPGKTL
IFAARDAHADDLVRLLVEELQEEYGNDAVPHGMVMKITGNVDKADDLILKFKNDPHPKYV
VTVDLLTTGIDVPTICNLVFVRRVKSRILYDQMIGRATRLCPEIGKEHFRIFDAVDLYAE
LQEMTDMRPVVVKPDISLGQLVTDLDKAETEEDKSWVAGQVIVRMRAMANRMDAETRESF
ERHTGETPENAVQRLATLSGSELQDWLKSHPRVIELLERRPIRTGSGNDGVVISTHEDEL
LRIEEIFGKNTTPEDYITGFERFIRENMNQVPALIAVTQRPRDLTRKELSELAGLLDEKN
YSEAMLRAAYGKVRNADIAAHIIGFVRQAAIGDPLIPYATRVENAIGKIEASRPWTQKQK
EWLRRIGRALKDKPVADPTLLDQGVFADKGGFKRISQEFDGELDDVLHAFNEAIWAPPAA
NT seq 3423 nt   +upstreamnt  +downstreamnt
ttgggtggggcattgtcggtaaatttcgaccatctgaaatcgctgagtcccgaactacag
cgtctgggcacgcttgctgaacgcttctttgcagatgacgccaatacctcgctgatcaag
agccgtcagttcggcgaatacatggtcaaggagatcgccgcgctctccggtgtctatgat
cccgctgcccgtgagacgacgcacgatctgcttcggcggctcgcgacccagcagatcctg
ccgcgcgaggtggccgacatcttccacgccgtgcgcaagagcggcaacgaggcgacccac
aatctggcagggtcaccgaccgaggcgctggccgccctcaagttctgccgggcgctgggc
gtctggtatcgccgcacctacggacgcgatccgaacttcagaccaggccccttcgtccct
cccaaggcctccgccgatatcgatcaggcaacgcaggcagaactggccacgcttcgtcgg
caggttcgggaagccgaggcgcagctcgcggccgcccattcctcggcggatgaactcgcc
aaggcccgtgccgcagccgatgaactcgcccgccaggctgccgctgacaacgcggtctgg
gaacagacggccgtcgagatggaggccaatcaggccgagctttcccgcaagctcgcggag
ctgcagaaggcggcgcaggcccagccgcaacaattgcagatggagttcaagcaggcaggc
cttcaggccgcgagccggttggaactcgacgagcggcagacccgccgcttgatcgacgcc
caactggtagatgcaggctgggaggccgacagcgatcgtctgagttatcaactgggcgcg
cgcccggaagaaggccggaaccttgctatcgccgagtggccggcagccggtggacgtgct
gactatgggctgttcattggcttgacgtgcgtcggtatcatcgaggcaaagcgcgagagc
gttgacgtgccttccacgctccagcaggccgagcgctacgcacgcaccatagcgctgccg
ccggagaacagccatccgggcggcctatggaatcatggtctcgccgacccgttccgcgtt
cccttcgtcttcaccacgaatggccgccctttcgtccgccagtggcagaccaaatcaggt
atctggttctgcgatctgcgtcgcgacacgaaccacccccgacctctgacaacctggttt
tcgccgaaggatcttctcgacatcctcgcgaccgatctcgacgccgcagcccaaggtctc
gccgaggacagtttcggcaagggcaggatgcgaccctaccaagaggacgcaatcgctgcg
attgagaatgcggtcgtcgccggccaacgcgatattctcgtgtcgatggcgacagggacg
ggcaagacgcgcaccagcatcgccctgatgtaccgcctgctgaagcataagcgcttccgc
cgtatcctcttcctggtagatcgaaaggcactcggcaagcagacaagcgacgccttggaa
acgaccgagatcgagggcatgctgaacttcgcccagatctacaaggttgccgggttggag
aagaaggttccggaggacgaggatcaggtgcaggtcgccaccgtccagtccctgatcgcc
cgcatcctcaacgaacctgacccggccaagcgtccgacgcctggcaccttcgattgcatt
atcgtcgatgaagctcatcgcggctacacgctggacgcagaactacgcgaaagcgatgtc
ggcttccgcaatctggatgactaccagtcagcctatcgccagatcctcgattacttcgat
gccgtgaaggtggcgttgacggcaacacccgcgcttcatacccgggagatctttggccat
ccggtctttcactatggctaccgccaagctgtcgtcgaaggttatctcaacgatcacctg
ccaccgaagcgaatcaccacagcactctccgaagccggcatccatttcgagggtggcgag
gaggtcgagatcatcgatcgcacgaccgggcagatcgatctgttcgaactcccggatgaa
gtttcgctcgactacgacgtcgccgatttcaacaagcgggtctattcggaggccttcaat
cgcatggtctgccgggcgatcgctacggaaattccgccaagcaagccaggcaagacgctg
atcttcgccgcccgcgacgcccatgcggatgatctcgtccgtctgctagtcgaggagttg
caggaggagtatggcaacgacgctgtgccgcacggcatggtgatgaagatcactggcaat
gtcgacaaggctgacgacctgatcctgaagttcaagaacgatccacatccgaaatacgtc
gttaccgtcgatcttctgaccacaggcattgatgtgccgaccatctgcaatctggtcttt
gtgcgcagggtcaaaagccgcattctctatgaccagatgatcggccgagccacgcggctt
tgcccggagatcggcaaggaacatttccgcatcttcgatgccgtcgatctctacgccgaa
ctgcaggagatgacggacatgcgccccgtcgtcgtcaagccggatatctcgctcggccag
cttgtcaccgacctggacaaggcagagacggaggaagacaagagttgggtcgcgggccag
gtgatcgtccgcatgcgcgccatggcaaaccgcatggatgctgaaacccgggagagtttc
gagcgccacacgggagagacgccggaaaacgcggtgcagcgtcttgccaccctttccggt
tccgaactgcaggattggctaaaatcccatccgcgcgtgatcgaacttctggagcgccgc
ccgatccggactggaagcggcaacgacggtgtggtcatctccacccatgaagacgagttg
ctgcgcatcgaggaaatctttggcaagaacaccacgccggaggattacatcaccggcttc
gagcgcttcatccgggagaatatgaaccaggtcccggcgctgattgccgtcacccaacga
ccgcgtgatctgacgcgcaaggaactgtcggaactggcaggcctgctggacgagaagaac
tattccgaagctatgctgcgcgccgcctatggcaaggtccgcaatgccgatatcgccgcc
catatcatcggcttcgtccgccaggcagcgatcggcgatccgctcatcccctatgccacg
cgtgtggaaaacgcgattgggaagatcgaggcctcgcgcccctggacccagaaacagaag
gaatggctgcgccgcattggccgtgcgctgaaggacaagccggtggccgatccgacgctg
cttgaccagggcgtctttgcggacaagggcggcttcaagcgcatctcccaggaattcgat
ggcgagctggatgatgtcctgcacgccttcaacgaggcgatctgggcgccgcccgccgcc
tga

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