Sinorhizobium fredii NGR234: NGR_c01670
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Entry
NGR_c01670 CDS
T00888
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00071
Fatty acid degradation
rhi00280
Valine, leucine and isoleucine degradation
rhi00310
Lysine degradation
rhi00362
Benzoate degradation
rhi00380
Tryptophan metabolism
rhi00410
beta-Alanine metabolism
rhi00640
Propanoate metabolism
rhi00650
Butanoate metabolism
rhi00907
Pinene, camphor and geraniol degradation
rhi00930
Caprolactam degradation
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
rhi01200
Carbon metabolism
rhi01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NGR_c01670 (fadB)
00650 Butanoate metabolism
NGR_c01670 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
NGR_c01670 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NGR_c01670 (fadB)
00310 Lysine degradation
NGR_c01670 (fadB)
00380 Tryptophan metabolism
NGR_c01670 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NGR_c01670 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NGR_c01670 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NGR_c01670 (fadB)
00930 Caprolactam degradation
NGR_c01670 (fadB)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NGR_c01670 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NGR_c01670 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NGR_c01670 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
FAD_binding_3
2-Hacid_dh_C
NAD_binding_8
UDPG_MGDP_dh_N
Pyr_redox
ApbA
F420_oxidored
GIDA
Motif
Other DBs
NCBI-ProteinID:
ACP23967
UniProt:
C3MFR6
LinkDB
All DBs
Position
complement(183977..186190)
Genome browser
AA seq
737 aa
AA seq
DB search
MSYTNFKIETDADGIALVTWDMPDKSMNVFTEEVMDELDAIVDQTTADAAVKGVVFTSGK
SSFSGGADLSMIKSMFTLQAEERKKDPANAAQKLFNLVGRMTGLFRKLETSGKPWVSAIN
GTCMGGAFELSLACHGRVASNSKSVKIALPEVKVGIFPGAGGTQRVPRLTNTQDALQMMT
TGSSLTAARAKAMGLVHEVVEPEKLVEAAKAMIKNGLKAVQPWDEKGFKLPGGGVWTPAS
AQLWPAASGILRRETYGNYPGAIAILKCVYEGLQVPFDTGLKIEQRYFTEILQTTEAFSM
IRSLFVSMQELGKGARRPAGVPKTEFKTVGVVGAGFMGASIAYVTAAAGIPVTLIDRDME
ASEKGKAHSEGLVKDAIGKGRLTKEEGEALLSRITPSADYGDLKDAGLVVEAVFEDRQVK
KDVIEKVEAVIAPDAIFASNTSTLPITGLARNSKRPEQFIGVHFFSPVEKMMLTEVIVGK
ETGDKALATALDYVAAIKKTPIVVNDTRGFYVNRCVFRYIHEAYDMLIEGVPPAMIENAA
KMAGMPVGPLSLNDEVAIDLSQKILKATVADLGEKAVDPRHMELVNKMVDELDRRGRKNG
KGFYEYPAKPAKKYLWPGLKELYSQKPADKVDVEVVKQRFLATIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGTLSYIDGMGIKAFVAMCNKLAKAYGDHFEPTPLLKEMAEKG
ETFYGRFDPYGQAQKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacacgaacttcaagatcgaaaccgacgcggacggcatcgcactcgtcacctgg
gacatgcccgacaagtcgatgaacgtcttcactgaggaggtgatggacgaactcgatgcg
atcgtcgaccagacgaccgccgatgccgccgtcaagggcgtcgtcttcacctccggcaag
tcgtccttctccggcggcgccgatctgtcgatgatcaagtcgatgttcacgttgcaggcc
gaggagaggaaaaaggatccggccaacgccgcgcagaagctcttcaatctcgtcggtcgc
atgaccgggctgttccgcaagctcgaaacctcaggcaagccgtgggtctcggcgatcaac
ggcacctgcatgggcggcgccttcgaactgtcgctcgcctgccacggccgcgtcgcttcc
aactcgaaatccgtgaagatcgccctccccgaggtcaaggtcggcatcttcccgggcgcc
ggcggcacccagcgcgtgccgcggctcaccaatacgcaggacgccctgcagatgatgacc
accggctcgtcgctgaccgcggcgcgcgccaaggcgatgggcctcgtgcacgaagtggtc
gagccggagaagctggtcgaagccgccaaggcgatgatcaagaacgggctcaaagccgtg
cagccctgggacgagaagggcttcaagcttccgggcggcggcgtctggacgcctgcctcc
gcgcagctctggccggcagcgtccggcattctgcgccgtgaaacctatggcaattatccg
ggcgccatcgccatcctgaaatgcgtctatgaaggtctgcaggtgccgttcgacaccggg
ctcaagatcgagcagcgctatttcaccgagatcctgcagaccaccgaagccttctctatg
atccgctcgctgttcgtctcgatgcaggagcttggcaagggcgcccgccgcccggccggc
gtcccgaaaacggagttcaagacggtcggcgtcgtcggcgccggcttcatgggcgcctcg
atcgcctacgtgacggccgccgccggcattcccgtcaccctcatcgaccgcgacatggaa
gcgtccgagaagggcaaggcgcattcggaggggctggtcaaggacgcgatcggcaagggg
cggctgaccaaggaagagggcgaggcgctgctttcgcgcatcacgccatcggccgactat
ggcgatctcaaggacgccggcctcgtcgtcgaggcggtgttcgaggaccggcaggtcaag
aaggacgtgatcgagaaggtcgaggcggtcatcgccccggacgccatcttcgcctccaac
acctcgacgctgccgatcaccggccttgccaggaattcgaagcggccggagcagttcatc
ggcgtccacttcttctcgccggtcgaaaagatgatgctgacggaagtgatcgtcggcaag
gagaccggcgacaaggcgctggccacggcgctcgactatgtcgcggcgatcaagaagacg
ccgatcgtcgtcaacgacacccgcggcttctacgtcaaccgctgcgtcttccgctatatc
cacgaagcctacgacatgctgatcgagggggtgccgccggcgatgatcgagaatgccgcc
aagatggccggcatgccggtcggaccgctgtcgctcaacgacgaggtggcgatcgacctc
agccagaagatcctcaaggcgacggtcgccgacctcggcgaaaaggccgtcgacccgcgc
cacatggaactggtcaacaagatggtcgacgaactcgaccggcgcggccgcaagaacggc
aagggcttctacgagtatccggcgaagccggccaagaaatatctgtggccggggctcaag
gagctctactcgcagaagccggcagacaaggtcgatgtcgaggtggtgaagcagcgcttc
ctggcgacgatcgcgttggaagcggcccgcaccatcgaggaaggcatcgtcaccgacccg
cgcgaggcggatgtcggctcgatcctcggcttcggcttcgcgccctacaccggcggcacg
ctctcctatatcgacggcatgggcatcaaagccttcgtcgcgatgtgcaacaaactagcc
aaggcttatggcgaccacttcgagccgacgccgctcttgaaggagatggccgaaaagggc
gagaccttctacggtcggttcgacccctacgggcaggcgcagaaggcggcttaa
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