Sinorhizobium fredii NGR234: NGR_c02360
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Entry
NGR_c02360 CDS
T00888
Name
(GenBank) conserved hypothetical protein, contains ice nucleation protein domain
Organism
rhi
Sinorhizobium fredii NGR234
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALTTAQ_rpt
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
ACP24034
UniProt:
C3MFY3
LinkDB
All DBs
Position
271818..278894
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AA seq
2358 aa
AA seq
DB search
MTSIISSLSPTLIKSYSTAAVAAWTTEDVASLTTKQISAMSSAQIAALDTEDVDVLSSRQ
LGAISPSAIVGLTLEQLAVLDQSDIESFGTSQVAALTTKQIDGLSAEQAEALSSTQVGAL
SALQLSVLTEEDLESFSTADIAAIGAKAITGLPADVVASLSTDQIAGLSTRAVAALSTAQ
IAALSTDQLAALTTAQVTALKASQIEALGTDDIATLSTQQMAALSASAISGLSTKQIAAL
SVDQIEALTVSQVKALTAAQLGSLETDGIAAFSTAEIAAISRAVWGLTTEAFAALSTAQV
AALNTAAVASLTTAQMAALSADQAEAMSVLQVKALNSRQLAALGTEGIATFSTGEIAAIA
NLAIKGVSTDAIAALSTAQVAALSTSAISGLTTAQSEAFSSDQAAVLSAAQLRTLSSAQV
AALGTDNIEALSTDQIAALNTKGVMGLTTDQVAALSTDQVEALSVTQVKALNALQLEALG
TDGLAMFSTGEIAALSNKAILGVDAEVIASLSTDQIAALSTSAVASLTSAQLAALSTDQA
EALSVSQVKVLSSAQLAALGEDGIATFSTAEIAAITSKAVPGVSDDAITALSTAQIAALS
TTAVASLTTAQVAALSTDQTAALSTAQLKALSSTQLAALSTDNVAALTTVQVAALGTKAV
AGLTADQVEALSSDQVAALSTQQVAALGSEQLAVLSAEDIAAFSTADIAAISSSAIAGLS
ADLMEALTTAQIVALSTKGVARLSTDQIDALSSDQLAALSSVQVAVLSSAQLSALEAEDI
ATFSTADIAAIGSKAISGLSEDVVAALTSTQIAALSTGGVAGLSTDQMATLSSDQVVALS
TKQIAALKSTQVAALSTETVAALSSDLIAALSTAGINELTTDQVEALSTDQIVALSTKQV
AALSSAQIAALDTSDIAVFSTEQIAVLTTAAISGLSTRQIDALSTEQMEALTAVQVGALS
SAQLGALGTEDIAVFSTKDIAAISAAAMAGLSTAVVAALSTDEIALLSTAGIAGLSSAQL
NVLSTSQLAALSTKQAAALTSAQVAALGTSGLAALSTDQISVLSAAAIAGLTTKQLVALG
AGQMEALTSTQIGALSATQLGVLGAEDIAAFSTKDIAAIRSTAISSLSTAAIAALSTDQI
AAVSAAGIAGLSSAQVNALSATQLAALSTKQVAALTSAQVTALGSSDITALSADQIEALG
SAAVAGLTTRQLAALSTDQLEALTAVQTGALSSVQLGALGAEDVAVFSTKDIAAIGSSAI
AGLSTAAIASLSTEQIGALSAAAVSALTTKQIAVLSSGQIAALSTEQLGGLTSQQIAALD
ADDIKALSIDDIAALGADLVSGLSTDVIAAFSTDQIAALSTAAVAALSTKQVDALSTGQL
AVLTTAQIGALTSRQVDALSTDDVATLTTDQIAALSAAGVVGLSTADIAILSSGQVDALT
TSQIAALGSKQIAALGTDDIAGFSVAEIAALSSSAVAGLSTETIAALSAEQIAALSTAGI
AGLSTAQVNALSTDQIGALSTEQVAALSSKQVAALGTDDMAALSADQIAALGTTGIAVLS
SAQIDALSAEQLEALTSVQVAALSSTQIAALSTDDLAAFSTADIAAISSAAVAGLSTDTL
AALSADQIAALSAAGIADLSTAQINALSADQLEALSTDQIAALSSKQVAALGTDDIAALS
TEQIAALSTAGVAALSTAQIQALSADQLEALTPSQVAVMSSTQIAALSTADLESFSSADI
GAIGSSAVAGLSTDTLAALSADQIAALSATGVAGLSTVQILALSTDQIEALSTDQIAALS
SKQLAVLGTDDIAVLSTDQIAALGTAAIAGLSTTQINALNADQLEAMTSGQVAVMSSTQI
AALSTGDLESFSTADIAAISSRAVAGLSTDTIAALSADQIAALGTGGVAGLSTAQINALN
TDQVEALTSLQIGALTSQQIAVLGTDDLETFSTDEIAAISSTAVLGLSTDTIAALSVDQV
AALSSAGISGLSTAQINALSTDQIEALSTAQIGGLGSKQVAALGTADLAVLSTSQIAALS
TAGIAGLSSEQVGALSDEQVEALSTVQIAAMSSDALSGLSTDDLEGFSVEELAAISSSAI
RGLSTDFIAGLSTAEIAALGTASLAGLSSAQVGAMSAEQIDTLSTLQIAALSADGLAGLT
TEDLGTFTTGELVAISAAAIKGLSTTFVAALSTAEIAALTASQVGSLSYNQVAAMSTTQI
ATLSTAQLSALNAIQAAALGTDDIAQLSTDDIVALGTSAISGLTTRVVAALTTDQAEALT
AVQVGAMTSAQVAALETEDLATFSAEDVASFSSYGVAGLSTEDIGNLSSTQLNALMDSQM
DALDSDQIAAVIAAYLGM
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atgacctccatcatttcgtccctcagccccactctgatcaaatcctattcgacagcggcc
gttgctgcctggacgacggaagacgtggcttcgctgacgacgaagcagatcagcgcgatg
tcgtcagctcagatcgcggcgctcgacacggaggatgtcgatgttctcagctcccggcag
ctgggcgccatatctcccagcgccattgtcggtttgaccctggagcaactcgccgtcctc
gaccaatccgacatcgagagcttcggtacgagccaggtcgcggccctgacgaccaagcag
atagacggtttgtcggcggagcaggcggaggcgttgagctcgacccaggtcggagccttg
agcgccttgcagctctcggtcttgaccgaggaagacctggagtccttctcgaccgccgac
atcgccgccatcggcgcgaaagccataaccgggctcccggccgatgtcgtcgcatccctt
tccacggatcagattgccggcttgagcacccgtgccgtcgccgccctgtcgaccgcgcag
atcgccgccctgtccaccgatcagcttgccgccttgacgaccgcccaggtcacagcgctg
aaggcctcgcaaatcgaggccttgggcaccgacgacattgccacgctttccacccagcag
atggctgcgttgagcgcctcggcaatttcggggctttccaccaaacagatcgccgccctg
tcggtcgaccagatcgaggcactgaccgtctcgcaggtgaaggcgctgacggcggcgcaa
ctcgggtccctcgagaccgacggcatagcggcattctcgactgccgagatcgcggcgatc
agcagggccgtatggggcttgacgacggaggccttcgccgcactctccaccgcccaggtt
gccgccctgaacacggccgccgtcgccagcctgacgacggcgcagatggccgccttgtcg
gctgaccaggccgaggcgatgtccgtcttgcaggtgaaggcactgaattcgagacagctt
gcggcgctcgggaccgagggcattgcgacattctcgaccggcgaaatcgccgcgatcgcc
aacctggccatcaagggcgtgagcacggacgcgatcgctgcactttcgaccgctcaggtt
gcggcgctcagcacgagtgcgatctcgggcttgacgaccgcacagagcgaggcattttcc
tccgaccaggccgcggtcctttccgcggcacagctgcggacgctgagctcggcgcaagtc
gccgcacttggcaccgacaatatcgaggcgctctccacagaccagatcgcggcgctcaac
accaagggcgtcatgggcctgacgaccgatcaagtcgccgccttgtcgaccgaccaggtc
gaggctctgtccgtcacacaggtgaaggccctgaacgcactgcagcttgaggcgctcggg
accgacggcttggcaatgttctctaccggcgagatcgccgcactcagcaacaaggccatt
ctgggggtggacgccgaggtcattgcgtccctgtctaccgatcagatcgcggcgctcagc
acgagtgcggtcgccagcctgacgagcgcccagctggcggctttgtcgaccgaccaggcg
gaggccttgtccgtctcgcaggtgaaagtcctgagctcggcccagctcgccgcccttggg
gaagacgggattgcgacgttctcgaccgccgagatcgcggcgatcaccagcaaagccgtg
cccggcgtcagcgacgacgccataacagcgctttccacggcccagatagcggcactcagc
acgactgcagtcgcgagcctgacgaccgcacaggtcgccgccttgtcgaccgaccagacc
gcggccctctccaccgcgcagcttaaagccctgagttccacgcaactcgccgccttgagc
acggacaacgtcgcggctttgaccacggttcaggtcgccgcgcttggcaccaaggcggtc
gccggcctaaccgccgatcaggtcgaagccttgtcgtccgatcaggtcgcggctctctcc
actcaacaggttgccgccctcggctccgagcagcttgccgttctcagtgcagaggacata
gcggcattctcgaccgccgatatcgcggcgatcagttcgagcgccattgccggattgtcg
gcagatctcatggaagccctcacgacggcccagatcgtagcgctcagcacgaagggcgtc
gcgcgcctcagcaccgatcagatcgacgcgctgtccagcgaccagcttgcagccttgtcg
tcagtccaggttgccgttctaagctccgcgcagctctcggccctggaggcggaggacatt
gcaaccttctcgactgccgatattgccgcaataggctccaaggccatttccggcctgtcg
gaggatgtcgtcgccgccctgacctcgacgcagattgccgcgctcagcaccggcggcgtt
gccgggctgagcacggatcagatggcgacgctgagctccgaccaggtcgtcgctttgagc
accaaacagatcgcagcgctgaaatcgacgcaagtcgccgccttgagtacggagactgtc
gcggccctgtcctcggacctgatcgccgcgctcagcactgcaggcatcaacgaactgacc
accgatcaggtcgaggcgctatccaccgaccagatcgtggcgctgagcaccaagcaggtt
gccgcgctgagctctgcgcaaatcgccgcgctggacaccagcgatatcgcggtgttttcg
accgaacagatcgccgtgttgacgacggccgcgatcagcgggctgagcaccaggcagatc
gacgcgctgagcaccgagcagatggaagccctgaccgccgtgcaagtcggcgcgctcagc
tcggcgcagctgggggcgctcggaacggaagacatagcggtcttctcgacgaaggacatc
gcggccatcagcgccgctgcgatggcgggactgtcgacggccgtcgtggccgccctttcc
accgatgagatcgctcttctgagcactgccggcattgccggcctcagcagcgcgcagttg
aacgtgctcagcaccagccagctcgccgccttgagcaccaagcaggccgctgcgctcact
tcggcgcaggtggccgccttgggtacgagcggacttgcggccctctcgacggatcagatc
tcggtcctcagtgccgctgccatcgcgggactgaccaccaagcagctcgttgccctgggc
gccggtcaaatggaagccctgacctcgacccagatcggcgccttgagcgcgacgcagctc
ggggttctgggggcggaagacattgcggcgttctcgaccaaggacattgccgctatccgg
tcgaccgccatttcgagcctctcgacggccgccatagctgccctctcgaccgatcagatc
gccgccgtaagcgcggccggcattgccggtctgagcagcgcgcaggtcaacgcgctcagc
gccacgcagctcgccgccctgagcaccaagcaggttgccgcgctcacgtcggcgcaagtc
accgccctggggtcgagcgatatcaccgcgctttccgccgatcagatcgaggccttgggt
tcggcagccgtcgcgggcctgaccaccaggcagctcgctgccttgagcacggatcagctg
gaggccctgaccgcggtccagactggcgccctgagctcggtgcagcttggagccctgggc
gcggaagacgtggcggtcttctcgaccaaggacatcgcggcgatcggttcgagtgccata
gcaggactgtccacggctgccatcgcttcgctctcgaccgagcagatcggcgccctgagc
gcggccgccgtgtcggcattgaccaccaaacagatcgctgttctgagttccggccagatt
gccgcgctgtcgaccgaacagctcggcgggctgacctcgcagcagatcgctgcgctggat
gcggacgacatcaaggcgctgtcgatcgacgacatcgcggcgcttggcgcggatctcgtt
tccggcctttcaacggacgtcatagctgccttctccaccgaccagatcgccgcgttgagc
acggccgccgtcgcggcgttgagcaccaagcaggtcgatgccttgagcaccggtcagctt
gcggtcttgaccacggcccagatcggggcgctcacctccagacaggtcgatgccttgagc
acggatgacgtggcgacgctcacgaccgaccagatcgccgctttgagcgcggccggcgtg
gtcggcctgagcaccgcggacatcgccatcctgagctcgggccaggtcgatgccctgacg
acgagccagatcgcggctctcggctccaagcaaatcgccgccttgggcacggacgacatt
gcaggcttctcggtcgcggaaattgcggccctcagttcgagtgcggtagcgggactgtcc
accgagacgattgcggcgctttcggcggaacagatcgcggccttgagcacggccggcatt
gccggcctttccaccgcccaggtcaatgcgctgagcaccgaccagatcggggcgctgtcg
accgaacaggtcgctgctctcagctccaagcaggtggcggcgctgggcaccgacgacatg
gcggcgctttcggcggaccagattgccgcgctgggtacgaccggcattgcggtcctttcc
agcgcacagatcgatgcgctgagcgccgaacagctcgaagccctgacttccgtccaggtc
gcggcgctgagttcgacgcagatcgctgcgctcagcaccgatgatctggccgccttctcg
accgcggatattgcggcgatcagttcggctgccgtggcggggctgtccaccgacacgctg
gcggcgctttcagcggatcagatcgccgccctgagcgcggccggtatcgccgacctttcc
acggcccagatcaatgccttgagcgccgaccagctcgaagcgctgagtaccgaccagatc
gccgcgcttagctccaaacaggtggcggcgctgggcacagacgacatagcggcgttgtcg
acggaacagattgccgcgctgagcaccgccggcgttgcagctctttccacggcgcagatc
caggcgctgagcgccgatcagctcgaggctctgaccccgagccaggtggcggtgatgagt
tcgacgcagatcgctgcgttgagcaccgccgatctggagagcttttccagcgcggatatc
ggcgcgatcggttcgagcgccgtagccggcctgtccaccgacacgctggccgcgctttcg
gcggaccagatcgccgccctgagtgcgaccggcgtcgccggtctttccaccgtgcagatc
ctggcgctgagcaccgaccagatcgaggccctgtcgaccgaccagattgccgccctcagc
tccaagcagctggcggtgctgggaaccgacgacattgcggttctctctacggaccagatt
gccgcgctgggtacggccgcaatagcgggcctttccacgacccagatcaacgcgctgaat
gccgatcagctcgaggccatgacctccggccaggtcgcggtcatgagttcgacgcagatc
gcggcgctgagcacgggcgatctggagagcttctcgaccgccgatatcgcggcgatcagt
tcgcgcgccgtagcggggttgtccaccgacacgatagcggcgctttcggcggatcagatc
gcggccctcggcaccggtggcgtcgccggcctttccaccgcccagatcaacgcgctgaac
accgaccaggtcgaggcgctcacttctctccagattggcgcgctgacttcgcagcagatc
gccgtcctcggcaccgacgatctggagaccttctcgacggacgagatagcggcgatcagt
tcgactgccgtgttgggactgtcgaccgacacgatagcggcgctttcggtcgatcaggtt
gcggccttgagctcggccggcatttcggggctttccaccgcccagatcaatgcgctgagc
accgaccagattgaagccttgtcgaccgcgcagatcggcggcctcggctccaaacaggtg
gcggcgctcggcaccgcggatctcgcggtgctgtcgacgagccagattgcagcgctgagc
acggcgggcattgcgggcctgagcagcgagcaggtcggcgctttgagcgacgagcaggtc
gaagccctttccaccgtccagattgccgctatgagctcggatgcgttgtcaggccttagc
accgatgacctggaggggttctcggtcgaggaacttgcggcgatcagctcttcggccatc
aggggcttgtccacggatttcatcgccggactgtccaccgccgagattgccgctctgggc
acggcgagccttgcgggtctgagcagcgctcaggtcggggcgatgagcgccgaacagatc
gatacgctgtccaccctccagattgccgccttgagcgccgacgggctcgccggtctgacc
accgaggacctcggcacgttcacgaccggagaactggtggcgatcagcgcggccgccata
aagggactgtccacgacctttgtcgccgcgctttccacggccgagatcgccgccctgacg
gcaagccaggtcgggtcgctgagctacaaccaggtggcggcgatgagcaccacgcaaatt
gccaccttgtccaccgcgcagctcagtgctctgaacgccatacaggccgcggccctgggg
acggacgacatcgcccagctctccaccgatgatatcgtcgccttgggcacgagtgcgatc
tccggactgaccaccagggtcgtcgccgccttgacgacggatcaggcggaggccctgacg
gccgttcaggtcggggcgatgacctcggcgcaggtcgcggccttggagaccgaggatctg
gcgaccttctcggcggaggatgtcgcctcgttcagctcctatggggtcgcggggctatcc
acggaagacattggcaatctgtccagcacgcagctgaacgccttgatggactcgcagatg
gacgctctggattccgatcagatcgcggcagtcattgcggcctatctggggatgtaa
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