Sinorhizobium fredii NGR234: NGR_c03920
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Entry
NGR_c03920 CDS
T00888
Symbol
glcD2
Name
(GenBank) glycolate oxidase, subunit GlcD
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGR_c03920 (glcD2)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
NGR_c03920 (glcD2)
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ACP24188
UniProt:
C3MGS3
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Position
438119..439558
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AA seq
479 aa
AA seq
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MPETIGFLKPRQAVLDRRPEIIADLADLLPEGCLISDERGLKPFETDAFLAYRRLPLAVV
LPETTEQVSAVLKYCSRYGIPVVPRGAGTSLSGGAIPQEDAIVIGLSKMSRILDVDLFNR
TATVQAGVTNLNISDAVSADGFFYAPDPSSQLACTIGGNIGMNSGGAHCLKYGVTTNNLL
GVKMVLFDGTVIELGGKALDSSGYDLLGLVCGSEGQLGIVTEATVRLIAKPEGARPVLFG
FASSVAAGSCVADIIGSGIIPVAIEFMDKPAIEICEAFAHAGYPLDVEALLIVEVEGSEA
EMDTMLESIIAIARRHGVMTIKESQSALEAALIWKGRKSAFGATGRVADYICMDGTVPLS
QLSHVLRRTGEIVASYGLRVANVFHAGDGNMHPLILYNINDPEDAARAEAAGNDILKLCV
DAGGCLTGEHGVGIEKRDLMRHQYNKADLDQQMAVRAAFDPQWLLNPSKVFPLEGRPAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccggagacgatcggattcctgaaacccaggcaggccgtcctcgaccgccggccggag
atcattgccgacctcgccgacctcctgccggagggttgcctgatcagcgacgaacgcggg
ctgaagcccttcgagacggacgcatttctcgcctatcgccgcctgccgctcgccgttgtg
ctcccggagacgaccgagcaggtctccgcggtcctcaaatattgcagtcgctacggcatc
ccggtcgtgccgcgcggggccggcacgtcgctctccggcggcgccatcccgcaggaagac
gcgatcgtcatcggtctctcgaagatgtcgcgcattctcgatgtcgatctcttcaaccgg
acggcgacggtccaggcgggggtcaccaatctcaacatttccgacgcggtgagcgccgac
ggcttcttctacgcccccgatccgagctcccagctcgcctgcacgatcggcggcaacatc
ggcatgaattccggcggcgcccactgcctgaaatacggcgtcacgaccaacaacctcctg
ggcgtcaagatggtgctcttcgacggcacggtgatcgagctcggcggcaaggcgctggat
tcgtccggctacgatctgctcggcctcgtctgcggctcggaaggccagctcggcatcgtc
accgaggcgacggtgcggctgatcgccaagccggaaggggcgcgccccgtattgttcggc
ttcgcctcgtcggtcgcggccggttcctgcgtcgccgatatcatcgggtcgggcatcatc
ccagtggcgatcgagttcatggacaagccggcgatcgagatctgcgaggcctttgcccat
gccggctatccgctcgacgttgaggcgctgctgattgtcgaggtcgaggggtcggaggcg
gagatggacacgatgcttgagagcatcatcgcgatcgcccgccgtcacggcgtcatgacg
atcaaggaatcgcagtcggcgctcgaggcggcgctgatctggaaaggccggaaatccgcc
ttcggtgccaccgggcgggtcgccgactatatttgcatggacggcacggtgccgctcagc
cagctctcccatgtgttgcgtcggaccggcgagatcgtcgcgagctacgggctccgcgtc
gccaacgtcttccatgccggcgacggcaatatgcatccgctgatcctctacaacatcaac
gatccggaggatgcggcccgcgctgaagcggccggcaacgacatcctgaagctctgcgtc
gatgcgggcggctgcctgacgggcgagcacggtgtcggcatcgaaaagcgggatctgatg
cggcatcagtacaacaaggccgacctcgaccagcagatggccgtgcgcgccgccttcgat
ccgcaatggcttttgaacccgtcgaaggtatttccgctcgaaggacggcctgcggcatga
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