Sinorhizobium fredii NGR234: NGR_c04250
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Entry
NGR_c04250 CDS
T00888
Symbol
kdtA
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00540
Lipopolysaccharide biosynthesis
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NGR_c04250 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhi01005
]
NGR_c04250 (kdtA)
Enzymes [BR:
rhi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NGR_c04250 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
NGR_c04250 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
NGR_c04250 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
NGR_c04250 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
rhi01005
]
Lipid A
NGR_c04250 (kdtA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glycos_transf_1
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
ACP24221
UniProt:
C3MGV6
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All DBs
Position
475489..476802
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AA seq
437 aa
AA seq
DB search
MSSLRARLALSSYRWLGTAIYPFVVPYLAVRAAKGKEDPARRRERYGHASAPRPPGPLVW
FHAASVGETVAVTPLIKEIRRRGIAVVLTTGTTTSARVAAERLGTAVIHQYVPLDFKPAV
SRFLEYWQPDLAIIAESEIWPMTIVELGRRHIPQVLVNGRLSDRTFARWKKRPSLADALF
ENLALVIAQSDVDAERFRTLGALPVMVSGNLKVDTDAPPHDPQALRDYSQQIGARKTWAA
ISTFEGEEEAAGVVHHALKQRNGLLTIVVPRHPERGDAVEAALAAKGLKVARRTRGDRLT
PDVDIFLGDTIGEMGLYLRLTEIAFVGRSLFAEGGQNPLEPAMLGCAVLSGGNVQNFRET
YQMLAKNGSAKIVRDVEMLAKGVNYLLGNDDMRRSMIDAGLETVQQMRGALTATMKGLEP
YVNPLVVKARLEPRAES
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctgcgcgcacggcttgcgctgtccagctatcgctggctcggcacggcgatc
taccccttcgtcgtgccctacctggcggtgcgggcggcgaagggcaaggaggatccggcc
cggcggcgcgaacgctacggccatgcgagtgcgccgcgcccgccggggccgctcgtctgg
tttcatgcggccagtgttggggaaacggttgcggtcaccccgctgatcaaggaaatccgc
cgccgcggcatcgccgtggtcctgaccaccgggaccacgacctcggcgcgcgtcgccgcc
gagcgtctgggcaccgccgtcatccatcaatatgtgccgctcgatttcaagccggcggtg
agccgcttcctcgaatactggcagccggatctggcgatcatcgccgaatcggaaatctgg
ccgatgacgatcgtcgaactcggacggcgccacattccgcaggttctggtcaacgggcgc
ctttcggaccggaccttcgcccgctggaagaaacggccgtcgctcgccgatgcgctgttc
gagaacctcgcgctcgtcatcgcccagtccgatgtcgatgcggagcgcttccgcacgctc
ggcgcgctgccggtgatggtttcgggcaatctcaaggtcgacaccgacgcgccgccgcac
gatccgcaggcgctgcgcgattattctcagcagatcggtgcgcgaaagacctgggcggcg
atctccaccttcgagggcgaggaagaggcggccggggtcgttcaccacgccttgaagcag
cgcaatggcctgctgacgatcgtcgttccgcgtcatcccgagcgcggcgatgccgtcgag
gccgcattggccgccaaggggctcaaggttgcgcgccggacgcgcggcgaccgcctgacg
ccggacgtcgatatcttcctcggcgacacgatcggcgaaatgggcctttatctgcggctg
accgagattgccttcgtcggccgttcgctctttgccgaaggcggacagaacccgctggag
cccgccatgctcggctgcgccgtgctttcgggcggcaatgtccagaatttccgcgagacc
tatcagatgctcgccaagaacggcagcgccaagatcgtccgcgatgtcgaaatgctggcg
aagggcgtcaactacctgctcggcaacgacgacatgcgtcgctcgatgatcgacgccggg
ctcgaaaccgtgcaacagatgcgaggcgcactgacggcgacgatgaaggggctcgaaccc
tacgtcaatccgctggtggtaaaggcgcggctggagccgcgcgccgaaagctga
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