Sinorhizobium fredii NGR234: NGR_c04400
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Entry
NGR_c04400 CDS
T00888
Name
(GenBank) putative LuxR/GerE family transcriptional regulator
KO
K18098
LuxR family transcriptional regulator, quorum-sensing system regulator BjaR1
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c04400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_c04400
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NGR_c04400
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
TnsD
HTH_23
HTH_10
Sigma70_r4
HTH_24
FaeA
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ACP24236
UniProt:
C3MGX1
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Position
493000..493773
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AA seq
257 aa
AA seq
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MSWNARMQDTMTTGMTDVELPRGGDFASEIAKLETQFDIIRYMRRITHIFGFKTFLICSI
PPIDMERLSAATVISNMPAELLNKYDSLSMLRFSTGVRRLRETTTPFQITLEDWESEGGT
PDSAADYIVMLRENGIFQANYFPVHDAEGGRGAVILMGPEADLPMTAAMELQMIAIHVYN
RLAEIGSVWKSSSTTLSEREIQCLSWTAAGKTSAEIAGILGLSEHTVNHYLNHVTKKLDA
VNRTQAVVKAMKKGYIS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggaacgcgcgaatgcaagatacgatgacgaccgggatgactgacgtcgaacta
ccccggggcggtgatttcgcgtctgagatcgcaaagctggagactcagttcgatattatc
cgctacatgcggcggattacgcatattttcggtttcaagacgttcctcatctgctcgatt
ccgccgatcgacatggagcggctttccgccgccaccgtgatttccaacatgccggccgaa
cttctcaacaaatacgacagcctgtcgatgctgcgcttcagcacgggcgttcgtcggttg
agggagacgacgacccccttccagatcacgcttgaagattgggagagcgagggtggcacg
ccggattccgccgcggattacattgtgatgctgcgcgagaacggtatcttccaggcaaac
tatttcccggtccatgacgccgaaggcggccgcggcgcggtcattctcatgggtccggag
gcagacctgccgatgaccgcggcgatggaactgcagatgatcgcgatccacgtctacaac
cgtctcgccgagatcggctccgtctggaagagcagcagcacaaccctctcggagcgggaa
atccagtgcctgagctggacggccgccggcaagacgagcgccgaaatcgcggggatcctc
ggcctctccgagcataccgtcaatcactacctcaaccatgtcaccaagaagctcgacgcc
gtcaaccgcacgcaagcggtcgtgaaggcgatgaagaagggctatatcagctag
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