Sinorhizobium fredii NGR234: NGR_c04940
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Entry
NGR_c04940 CDS
T00888
Name
(GenBank) hemolysin-like protein
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhi03009
]
NGR_c04940
Enzymes [BR:
rhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
NGR_c04940
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
NGR_c04940
Ribosome biogenesis [BR:
rhi03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NGR_c04940
23S rRNA modification factors
NGR_c04940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
S4
S4_2
SYY_C-terminal
Methyltransf_25
Methyltransf_23
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
ACP24290
UniProt:
C3MHG2
LinkDB
All DBs
Position
complement(550182..550937)
Genome browser
AA seq
251 aa
AA seq
DB search
MSDNKHSTIRLDQLLLNKGLVASRARARDAIQRGTVMVDGRTVTKPATAFAANATITIDD
PAQDYVSRAALKLVGALDHFGFDPAGQICLDIGASTGGFTEVLLKRGAAHVVAVDVGHGQ
MHPRIAEDPGVTNIEGLNARAMTADDIGNRTITFIVSDVSFISLKLALPPALSLAGPGAR
CILLVKPQFEAGRDAISKAGLLKDPESAPTVAAELERWLVEDMGWRSLGLVPSPIAGGDG
NKEFLLAGLKP
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgtccgataacaagcactccacgatccggctcgaccaattgctgctgaacaagggcctg
gtggccagccgcgcccgcgcccgcgacgcgatccaacgggggaccgtcatggtcgacggg
cgcaccgtgaccaagcccgccactgcctttgcggcaaacgcaacgatcacgatcgacgat
ccggcgcaggattatgtctcccgcgccgccttgaagctcgttggcgcactcgaccatttc
ggcttcgatccggcaggtcagatctgcctcgacatcggcgcctcgacggggggcttcacc
gaggtactcctgaaacgcggtgccgcccatgtcgtcgcggtcgacgtcggccacgggcag
atgcatccgcgcatcgcggaagacccgggggtcacgaatatcgaagggctgaatgcccgg
gcgatgacggcagacgatatcggcaaccgaaccatcaccttcatcgtctccgacgtgtcc
ttcatctcgctcaagctggcgctgccgccggcgctgtcccttgccgggcccggcgcccgt
tgcatcctgctcgtcaagccgcagttcgaggccggacgcgatgcgatcagcaaggccggc
ctcctcaaggatccggagagtgcgcccaccgtcgccgccgagctcgagcgctggctggta
gaagacatgggctggcggagccttggcctcgtcccctcgcccattgccggcggcgacggc
aacaaggaatttctcctcgcagggctgaagccatga
DBGET
integrated database retrieval system
