Sinorhizobium fredii NGR234: NGR_c07920
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Entry
NGR_c07920 CDS
T00888
Name
(GenBank) DNA polymerase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NGR_c07920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c07920
Enzymes [BR:
rhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NGR_c07920
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NGR_c07920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ACP24585
UniProt:
C3M8N9
LinkDB
All DBs
Position
complement(850488..851369)
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AA seq
293 aa
AA seq
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MISANDLSASELAALLAFHAEAGVEWLLEDEPVDRLAEFEAMKAKRADARAAPPVRQATP
PEVQGGRVQPATSGKARDARPAAPSVPPTVAIPDEQAVSEARFAAESARSLAELRTAMEA
FTGCNLKNSARNLVFADGNAASGIMVVGPMPYAEDDRDGQPFAGRHGDMLERMLSGIGLS
RSDILLTNVVPWRPPGNRVPSGREADICRPFIERQIALAEPRHMLLLGNFTARFFFGTNE
TIHQTRGQWRELSAGGHLVPALATLHPQDLISAPVNKRFAWQDLLAFKARISG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatctcggccaacgacctctccgcttcggaactcgccgcgctcctcgccttccatgcg
gaggcgggcgtcgaatggttgctcgaagacgagcccgtcgatcggctggcggaattcgaa
gcgatgaaggccaagcgcgccgacgcacgggctgccccgccggtccgacaggccacacct
ccggaggtccagggtggtcgggttcagccggcgacttcgggcaaggcccgcgacgctcgt
cccgccgcgccaagcgttccgccgacggtagcgatccccgacgagcaggcggtcagcgag
gcgcgcttcgctgccgaaagcgcccgatcgctcgccgagttgcgcacggcgatggaggct
tttactggctgcaacctgaaaaacagcgcccgcaacctcgtttttgccgacggtaacgcc
gcatccggcatcatggtcgtcgggccgatgccctatgcggaggacgaccgggacggccag
ccctttgccggcaggcacggcgatatgctcgaacggatgctttccggcatcggcctctcg
aggtccgacattctactcaccaatgtcgtgccctggcgaccacccggaaaccgtgtaccg
agcggccgggaggccgacatctgccgacccttcatcgagcggcagattgcgctcgccgag
cccaggcacatgcttctgctcggcaatttcaccgcccgcttcttcttcggcaccaacgag
acgatccatcagacgcgggggcaatggcgagagctttccgcgggaggccacctcgtgccg
gcgctggcgacgttgcatccccaggacctcatttccgcaccggtcaacaagcgtttcgcc
tggcaggatctactggctttcaaggcccggatcagcggctga
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