Sinorhizobium fredii NGR234: NGR_c09570
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Entry
NGR_c09570 CDS
T00888
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00260
Glycine, serine and threonine metabolism
rhi00460
Cyanoamino acid metabolism
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi00670
One carbon pool by folate
rhi00680
Methane metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
rhi01200
Carbon metabolism
rhi01230
Biosynthesis of amino acids
rhi01240
Biosynthesis of cofactors
rhi04981
Folate transport and metabolism
Module
rhi_M00140
C1-unit interconversion, prokaryotes
rhi_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NGR_c09570 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NGR_c09570 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NGR_c09570 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NGR_c09570 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NGR_c09570 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NGR_c09570 (glyA)
Enzymes [BR:
rhi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NGR_c09570 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ACP24747
UniProt:
C3M9I1
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All DBs
Position
1023306..1024685
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AA seq
459 aa
AA seq
DB search
MAQTAQRILLSACEEAKGTATLERSLAPMPAQTTDAFFTRSLADSDPEIFGAIEKELGRQ
RHEIELIASENIVSRAVLEAQGSIMTNKYAEGYPGKRYYGGCQYVDIAEELAIDRAKKLF
GVNFANVQPNSGSQMNQAVFLALLQPGDTFMGLDLNSGGHLTHGSPVNMSGKWFNVVSYG
VREDDHLLDMDDVAEKARKHKPKLIIAGGTAYSRIWDWKRFREIADEIGAWLMVDMAHIA
GLVAGGQHPSPFPHCHVATTTTHKSLRGPRGGMILTNDEDIAKKINSAVFPGLQGGPLMH
VIAAKAVAFGEALQPSFKDYAAQIVKNARTLAETLKANGLDIVSGGTDNHLMLVDLRKKN
ATGKRAEAALGRGYITCNKNGIPFDPEKPFVTSGVRLGAPAGTTRGFKEAEFKEIGELIV
EVLDGLKAANSDEGNAAVEAAVREKVVKLTDRFPMYGYM
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaccgcacagcggatattgctctcggcgtgcgaggaagctaaaggaacagcc
acccttgagaggagcctcgcgccgatgcctgcacagaccactgacgccttcttcacccgc
tctctcgccgacagcgacccggaaatcttcggtgcgatcgagaaggagctgggtcgccag
cgccacgagatcgagctgatcgcctccgaaaacatcgtgtcccgcgccgtcctcgaggcc
cagggctcgatcatgaccaacaaatatgccgagggctatccgggcaagcgctattacggc
ggctgccagtatgtcgatatcgccgaggaactggcgatcgatcgcgccaagaagctcttc
ggcgtcaacttcgccaacgtgcagcccaactccggttcgcagatgaaccaggcggtgttc
ctggcgctgctgcagcccggcgacaccttcatgggcctcgacctcaattccggcggccac
ctgacccacggctccccggtgaacatgtcgggcaagtggttcaacgtggtttcctacggc
gtacgcgaagacgatcacctgctcgacatggacgatgtcgccgagaaggcccgcaagcac
aagccgaagctgatcatcgccggcggcaccgcctattcgcgcatctgggactggaagcgt
ttccgcgaaatcgccgacgaaatcggcgcatggctgatggtcgacatggcccatattgcc
ggcctcgtcgccggtggccagcatccgtcgccgttcccgcattgccacgtcgcgacgacc
acgacgcacaagtcgctgcgcggcccgcgcggcggcatgatcctcaccaatgacgaggat
atcgccaagaagatcaactcggccgtcttccccggcctccagggcggcccgctgatgcat
gtgatcgccgccaaggccgttgccttcggcgaggcgctgcagccctccttcaaggactat
gcggcccagatcgtcaagaatgcccgcacgcttgccgagacgctgaaggccaacggccta
gacatcgtctccggcggcaccgacaaccacctgatgctggtcgacctgcgcaagaagaac
gcgaccggcaagcgcgccgaggcggcgctcggtcgtggctacatcacctgcaacaagaac
ggcatccccttcgatccggaaaagcccttcgtcacctcgggcgttcgcctcggtgcgccg
gccggcacgacgcgcggcttcaaggaggccgaattcaaggaaatcggcgagttgatcgtc
gaggtgcttgacggtctcaaggccgccaactccgatgaaggcaatgccgccgtcgaagct
gccgttcgcgaaaaggtcgtgaagctcaccgaccgtttcccgatgtacggctacatgtga
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