KEGG   Sinorhizobium fredii NGR234: NGR_c09590
Entry
NGR_c09590        CDS       T00888                                 
Symbol
ribD
Name
(GenBank) riboflavin biosynthesis protein RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi00740  Riboflavin metabolism
rhi01100  Metabolic pathways
rhi01110  Biosynthesis of secondary metabolites
rhi01240  Biosynthesis of cofactors
rhi02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    NGR_c09590 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NGR_c09590 (ribD)
Enzymes [BR:rhi01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     NGR_c09590 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     NGR_c09590 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: ACP24749
UniProt: C3M9I3
LinkDB
Position
1025187..1026290
AA seq 367 aa
MSGPTREDERFMAAALRLARRNLGLTSTNPSVGCVIVKDDTIVGRAVTAPGGRPHAETQA
LADAGEQARGATAYVTLEPCSHHGRTPPCVDALIASGIARVVVCLLDPDERVAGRGVVML
RDAGIDVDLGVLRDEGERVLEAYLMRQRMKRPHVTLKLAVSADGMIGRKGEGQVRITGAV
SRAQVQVLRAETDAILVGVGTANADDPELTVRLPGLEARSPIRIVLDRRLDLAVESKLVR
SARAVLSFAVADSVLDAPAMTRRSTLEEAGVEVLNADTIYDLLIALASRGISSLLVEGGA
RAARQFLDAGLVDRILLYTGPATIGEDGIRSPFDRMTVPAGFSLKRTARYGNDIFDDYER
DSGCSQA
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgagcgggccgacgcgtgaggacgagagattcatggcggcggcactgcgcctcgcccgc
cgcaatctcggtctgacatcgacaaatccctctgttggctgcgtcatcgtcaaggacgac
accattgtcggccgcgccgtgacggcgccgggcgggcgcccgcatgccgagacacaggcg
ctcgccgacgccggtgagcaggcgcggggggcgaccgcctatgtcaccctcgaaccctgt
tcgcatcacggcaggacgccgccttgcgtcgatgcgctgatcgcctcggggattgcccgc
gtcgtcgtctgccttctcgaccccgacgagcgtgtcgccggccgtggggtggtgatgctg
cgcgacgccggcatcgatgtcgatcttggcgtgctccgcgatgagggcgaacgtgtgctc
gaagcctatctcatgcgccagaggatgaaacggccgcatgtcacgctcaagcttgccgtt
tcggcagacggcatgatcggccgaaagggtgagggccaagtcaggatcaccggtgcggtc
tcgcgcgcccaggtccaggtgctgcgcgccgagacggatgccatcctcgtcggcgtcggc
acggcaaacgccgacgatccggaactcaccgttcggttacctggacttgaagcgcgttcg
ccgatccgcatcgtccttgatcgtcgtctcgatctggcggtcgaatcgaagctcgttcgc
tcggcgcgggcggttctatcgttcgccgttgccgattcggtgctcgatgcgcccgcaatg
acgaggcgcagcacgctggaagaagcgggcgtcgaagtgttgaacgccgacacgatatac
gaccttttgatcgcacttgcctcgcgcggcatttcatcgcttctggtcgaaggcggggcg
cgggcggcgcgccagtttctcgatgcgggtcttgtcgatcgaatcctgctttacaccggg
cccgcaaccattggcgaagacggcatccgatccccatttgatcgaatgaccgtgccggcg
ggattctcgctcaagcgcaccgcccgttacggcaacgacatattcgatgactacgaaaga
gatagcggatgttcacaggcataa

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