Sinorhizobium fredii NGR234: NGR_c12830
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Entry
NGR_c12830 CDS
T00888
Symbol
pdhB3
Name
(GenBank) pyruvate dehydrogenase E1 component beta subunit
KO
K00162
pyruvate dehydrogenase E1 component subunit beta [EC:
1.2.4.1
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00010
Glycolysis / Gluconeogenesis
rhi00020
Citrate cycle (TCA cycle)
rhi00620
Pyruvate metabolism
rhi00785
Lipoic acid metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
rhi01200
Carbon metabolism
rhi01210
2-Oxocarboxylic acid metabolism
Module
rhi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NGR_c12830 (pdhB3)
00020 Citrate cycle (TCA cycle)
NGR_c12830 (pdhB3)
00620 Pyruvate metabolism
NGR_c12830 (pdhB3)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NGR_c12830 (pdhB3)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
NGR_c12830 (pdhB3)
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Motif
Pfam:
Transket_pyr
Transketolase_C
Biotin_lipoyl
PFOR_II
Biotin_lipoyl_2
Gp77
QRPTase_N
GCV_H
Transketolase_C_1
HlyD_2
Motif
Other DBs
NCBI-ProteinID:
ACP25064
UniProt:
C3MBK2
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All DBs
Position
1323865..1325232
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AA seq
455 aa
AA seq
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MPVEILMPALSPTMEEGTLSKWLKNEGDKVASGDVIAEIETDKATMEVEAVDEGTIGKLL
IAAGTEGVKVNTPIAVLLQDGEAAGDIPAAKAEAPKPAAAEAPAPAAAPVAAQPKAEIPS
DPAIPAGTEMVTTTVREALRDAMAEEMRANDDVFVMGEEVAEYQGAYKITQGLLQEFGPR
RVVDTPITEHGFAGIGVGAAMTGLRPIVEFMTFNFAMQAIDHIINSAAKTLYMSGGQMGA
PIVFRGPSGAAARVAAQHSQCYAAWYSHIPGLKVVMPYTAADAKGLLKAAIRDPNPVIFL
ENEILYGQSFEVPKLDDFVLPIGKARIHRVGKDATIVSFGIGMTYAVKAAAELEAQGIDV
EIIDLRTIRPMDLPTVIESVKKTGRLVTVEEGYPQSSVGTEIATRVMQQAFDYLDAPILT
VAGKDVPMPYAANLEKLALPNVAEVVEAVKAVCYK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgccagtagaaattctcatgcctgccctttccccgacgatggaggaaggcacgctctcc
aagtggctgaagaacgagggcgacaaggtcgcctcgggcgacgtcattgccgagatcgag
accgacaaggcgacgatggaagtcgaagccgtcgacgagggcacgatcggcaagctgctg
atcgccgccggcaccgaaggcgtcaaggtcaatacgccgatagccgtgctgctccaggac
ggcgaagccgccggcgatatccccgccgccaaggcggaagcgccgaagccggcagcggcc
gaagctccggcgccggccgcggcccccgtcgcggcccagccgaaggcggaaatcccgtcc
gatcccgccattccggccgggacggaaatggtgacgaccaccgtccgcgaagcgctgcgc
gacgcgatggccgaggaaatgcgcgccaatgacgacgtcttcgtcatgggcgaggaggtt
gccgaatatcagggcgcctataagatcacccaagggttgcttcaggaattcggcccgcgc
cgggtggtcgacacgccgatcaccgagcatggctttgccggcatcggcgtcggcgcggcg
atgaccggcctgcggccgatcgtcgagttcatgaccttcaacttcgccatgcaggcgatc
gaccatatcatcaactccgccgccaagacgctctacatgtccggcggccagatgggcgca
ccgatcgtcttccgcggtccgagcggtgctgcggcccgcgtcgccgcccagcactcccag
tgctatgccgcctggtacagccacattcccggcctgaaggtcgtcatgccctatacggcg
gcggacgcgaagggcctcttgaaggccgccattcgtgatccgaacccggtgatcttcctc
gagaacgaaatcctctacggccagtcgttcgaagtgccgaagctcgacgatttcgtcctg
ccgatcggcaaggcccgcatccaccgcgtcggcaaggacgcgaccatcgtctccttcggc
atcggcatgacctatgcggtcaaggccgccgccgaacttgaggcacagggcatcgatgtc
gaaatcatcgacctgcgcaccattcgcccgatggacctgccgaccgtcatcgaatccgtc
aagaagaccggtcgcttggtcaccgtcgaggaaggttacccgcagtcctccgtcggcacc
gagatcgccacccgcgtcatgcagcaggccttcgactatctcgacgcgccgatcctgacc
gtcgccggcaaggatgtgccgatgccctatgcggccaacctcgagaagctcgctctgccg
aacgtcgccgaggtcgtcgaggcggtgaaagccgtctgctacaaataa
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