Sinorhizobium fredii NGR234: NGR_c13740
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Entry
NGR_c13740 CDS
T00888
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NGR_c13740 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhi01007
]
NGR_c13740 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhi03016
]
NGR_c13740 (serS)
Enzymes [BR:
rhi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
NGR_c13740 (serS)
Amino acid related enzymes [BR:
rhi01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
NGR_c13740 (serS)
Transfer RNA biogenesis [BR:
rhi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NGR_c13740 (serS)
Prokaryotic type
NGR_c13740 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Apolipoprotein
MazG
Motif
Other DBs
NCBI-ProteinID:
ACP25154
UniProt:
C3MBU2
LinkDB
All DBs
Position
1417877..1419160
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AA seq
427 aa
AA seq
DB search
MLDIKWIRENAGVLDNALAKRGAEPLSASLIALDERRRTVLQSLQEMQSRRNAASKEIGA
AMAQKNSELAEKLKAEVAELKDALPAAEEESRRMEAELTDILSRIPNVPLEDVPVGPDES
GNVVKRLVGSKPTWNHKPLEHFEIGEGLGFMDFEGAARIAGSRFTILKGQLARLERALGQ
FMLDLHTQEHGYIEVQPPLLVRDDAMYGTGQLPKFAEDLFRTTDGRWLIPTAEVPLTNMV
REQILEGEKLPLRFTALTPCFRSEAGSAGRDTRGMLRQHQFNKVELVSLTDAETSVDEHE
RMTACAEEVLKRLGLHYRVMTLCTGDMGFGARKTYDLEVWLPGQDAYREISSCSVCGDFQ
ARRMNARYRSKEEKGTKFVHTLNGSGVAVGRALIAVIENYLNEDGSVSVPEVLVPYMGGL
RRVEKAA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatatcaaatggattcgtgagaatgctggcgtgctcgacaatgccctggcgaag
cggggcgcggagccgctatccgcatcgctgatcgcccttgacgagcgccgccgcacggtc
ttgcagtcgctccaggagatgcagtcgcgccgcaacgccgcctcgaaggaaatcggcgcg
gccatggcgcagaagaacagcgaactggccgaaaaactcaaggccgaggttgccgagctg
aaggacgctctgccggccgccgaggaggaaagccggcggatggaagccgaactcaccgat
atcctgtcgcgcattccgaacgttccactcgaggacgtgcccgtcggtccggacgagagc
ggcaatgtcgtcaagcggctcgtcggcagcaagcccacctggaaccacaagccccttgag
catttcgagatcggcgagggcctggggttcatggatttcgagggggcggcgcgcattgcc
ggctcgcgtttcaccattctgaaagggcagcttgcccgcctggagcgcgcgcttggccag
ttcatgctggacctgcacacgcaggagcacggctatatcgaggtgcagccgccgctgctt
gttcgtgacgatgcgatgtacgggaccggtcagctgccgaaattcgcggaagatctcttc
cgcacgacggacggtcgctggttgattccgaccgcggaggttccgctgacgaacatggtg
cgcgagcagatcctcgagggcgagaagctgccgctgcgtttcacggccctgacgccgtgt
ttccgctcggaagcaggttcggccgggcgcgacacgcgcggcatgctgcgccagcaccag
ttcaacaaggtcgaactggtgtcgctcaccgacgccgagacttcggtcgatgagcacgag
cggatgaccgcctgcgccgaagaggttctgaagcggctcggcctgcattaccgcgtcatg
acgctctgcaccggcgacatgggctttggcgcccgcaagacctacgacctcgaagtctgg
ctgccggggcaggatgcctaccgcgaaatctcttcctgctcggtctgcggcgacttccag
gcacggcgcatgaacgcgcgctatcgcagcaaggaagagaagggcacgaagttcgtccac
acgctgaacggttccggcgtcgccgtcggccgcgcgctgatcgccgtcatcgagaactat
ctgaacgaggatggctccgtctccgtgccggaagttctggttccctacatggggggcctg
cgacgcgtcgagaaagcggcctga
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