Sinorhizobium fredii NGR234: NGR_c15750
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Entry
NGR_c15750 CDS
T00888
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large chain
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00220
Arginine biosynthesis
rhi00240
Pyrimidine metabolism
rhi00250
Alanine, aspartate and glutamate metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NGR_c15750 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NGR_c15750 (carB)
00220 Arginine biosynthesis
NGR_c15750 (carB)
Enzymes [BR:
rhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NGR_c15750 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D1
CPSase_L_D2
CPSase_L_D3
MGS
ATPgrasp_Ter
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
ACP25341
UniProt:
C3MD22
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All DBs
Position
complement(1623002..1626493)
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AA seq
1163 aa
AA seq
DB search
MPKRQDIKSILIIGAGPIVIGQACEFDYSGTQACKALKEEGYRVILVNSNPATIMTDPGL
ADATYVEPITPEVVAKIIAKERPDALLPTMGGQTALNTALSLRRMGVLDRYNVEMIGAKP
EAIDKAEDRALFREAMAKIGLETPKSRLANATDIKDLDRKAHEAERAALKAKFSGNDLDS
ALDELENKWNLGEGDRKQRYVNHAMAIAAQALDDVGLPAIIRPSFTLGGTGGGIAYNRSE
FFEIVGSGLDASPTTEVLIEESVLGWKEYEMEVVRDKADNCIIICSIENIDPMGVHTGDS
ITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPENGRLVVIEMNPRVSRS
SALASKATGFPIAKIAAKLAIGYTLDELENDITGGATPASFEPSIDYVVTKIPRFAFEKF
PGAEPTLTTAMKSVGEVMAIGRTFAESLQKALRGLETGLTGLDEIEVPDFDENGDGRNAI
RAAIGTPTPDRLRMVAQALRLGMTEAEVHEACKIDPWFIAQLKAIVDMEARIREHGLPQD
AENLRMLKAMGFSDARLATLTGKRPKEVAELRNALNVRPVYKRIDTCAAEFASPTAYMYS
TYETPFVGAARSEAQVSDRKKVVILGGGPNRIGQGIEFDYCCCHAAFALKDAGYEAIMIN
CNPETVSTDYDTSDRLYFEPLTAEDVIEIMRAEQENGTLHGVIVQFGGQTPLKLAEALEK
NGIPILGTAPDAIDLAEDRDRFQKLLMKLDLNQPRNGIAYSVEQARLVAAEIGFPLVVRP
SYVLGGRAMQIIHSEGMLQTYLLDTVPGLVPEDIKQRYPNDKTGQINTLLGKNPLLFDSY
LTNAIEVDVDCLCDGKDVFVSGIMEHIEEAGIHSGDSACSLPVHSLDKNLVDELERQTAA
LAKALNVGGLMNVQFAIKDGTIYVLEVNPRASRTVPFVAKTIGAPIAKIAARVMAGENLD
DAIAAYGKKPDPRNLKHIAVKEAVFPFARFPGVDTLLGPEMRSTGEVIGLDTDYALAFAK
SQLGAGVDLPRDGTVFVSVRDEDKVRVLPAIRVLADIGFKVVATGGTARFLGEHGITATK
INKVLEGRPHVEDAIRNRQVQLVINTTDGNKAISDSKSLRRATLMQKVPYYTTMAGAEAA
AHAIKALKAGNLEVRPLQSYFDA
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgccaagatatcaaatcgatcctcatcatcggcgcgggaccgatcgtgatc
ggccaggcatgcgagttcgattactccggcacccaggcttgcaaggcgctcaaggaggaa
ggctaccgggtcatcctcgtcaattccaacccggcaacgatcatgaccgaccccgggctt
gccgacgcgacctatgtcgagccgatcacccccgaggtcgtcgccaagatcatcgccaag
gaacgtcccgacgcgctgctgccgaccatgggcggacagacggcgttgaacacggcgctt
tcgctgcggcggatgggcgttctcgaccgctacaatgtcgagatgatcggcgccaagccc
gaggcgatcgacaaggccgaggaccgcgccctcttccgtgaggcgatggccaagatcggg
ctcgaaacgccgaagtcgcggctggcgaatgccaccgacatcaaggacctggaccgcaag
gcacatgaggcggaacgcgccgcgctcaaggcgaaattttccgggaacgacctcgactcg
gcgctcgacgaactcgagaacaagtggaacctcggcgaaggcgaccgcaagcagcgctat
gtgaaccacgcgatggcgatcgccgcgcaggcgctcgacgatgtcggcctgccggcaatc
atccggccctccttcacgctcggcggcacgggcggcggcatcgcctacaaccggtcggaa
ttcttcgagatcgtcggcagcggtctcgacgcgtcgccgacgacggaagtcctgatcgag
gagtcggtgctcggctggaaggaatatgaaatggaagtcgtccgcgacaaggcggacaat
tgcatcatcatctgctcgatcgagaacatcgacccgatgggcgtccatacgggcgattcc
atcaccgtcgcgccggcgctgacgctgaccgacaaggaatatcagatcatgcgcaacgcc
tcgatcgcggtcttgcgcgagatcggcgtcgagaccggcggatcgaacgtccaattcgcc
gtcaatccggaaaacggccgcttggttgtcatcgagatgaacccgcgcgtctcgcgctct
tcggcactcgcctccaaggccaccggtttcccaatcgccaagatcgccgccaagcttgcc
atcggctatacgctcgacgaactggagaacgatatcaccggtggagccacgccggcctcg
ttcgaaccgtcgatcgactatgtcgtcaccaagatcccgcgctttgccttcgaaaaattc
ccaggcgccgagcccacgctgaccaccgcaatgaagtcggtcggcgaagtcatggcgatc
ggccggacctttgcggaatcgctgcagaaggcgcttcgcgggctcgaaacgggattgacc
ggtctcgatgagatcgaggtcccggatttcgacgagaacggcgacggccgcaacgccatc
cgtgccgcgatcggcacgccgacccccgaccgcttgcggatggtcgcccaggcgctgcgc
ctcggcatgacggaagcggaagtgcacgaggcctgcaagatcgatccctggttcatcgcc
cagttgaaggcgatcgtcgacatggaggcccgcatccgcgaacacggcctgccgcaggat
gcggaaaacctccggatgctgaaggcgatgggcttctcggacgcacggcttgcgaccttg
accggcaagcgcccgaaggaagtggcggaattgcgcaacgcgctgaacgtccgcccggtc
tataagcgcatcgacacctgtgccgccgaattcgcctcgccgaccgcctacatgtattcg
acctatgagacgccgttcgtcggcgccgcgcgttccgaggcgcaggtctccgatcgcaag
aaggtcgtcatactgggtggcggcccgaaccggatcggccagggcatcgagttcgactat
tgctgctgccacgcggccttcgcgctaaaggacgccggctacgaagcgatcatgatcaac
tgcaacccggaaaccgtttcgaccgactatgatacctccgaccggctctatttcgagccc
ctgacggcggaagacgtgatcgagatcatgcgcgccgaacaggaaaacggcacgctgcac
ggcgtcatcgtgcagttcggcggccagacgccgctgaagcttgccgaggcgctggagaag
aacggcatcccgatcctcggcaccgcacccgacgcgatcgaccttgccgaggaccgcgac
cgcttccagaagctcttgatgaagctcgatctcaaccagccgcgcaacggcatcgcctac
tccgtcgagcaggcgcggctcgtcgccgccgaaatcggcttcccgctggtcgtgcgcccg
tcctacgttctcggcggccgcgccatgcagatcatccactcggaaggcatgctgcagacc
tacctgctcgatacggtcccggggctggtgccggaagacatcaagcagcgctatccgaat
gacaagaccggccagatcaacacgctgctcggcaagaacccgctgctcttcgacagctac
ctgaccaatgcgatcgaagtggacgtcgattgcctgtgcgacgggaaggatgtctttgtc
tccggtatcatggagcatatcgaggaggccggcattcactccggcgactcggcctgctcg
ctgccggtacactcgctcgacaagaacctcgtcgacgagctcgagcgccagacggcggca
cttgccaaggcgctgaacgtcggcggcttgatgaacgtgcagttcgccatcaaggacggc
acgatctatgtcctcgaagtcaatccgcgcgcgtcccgcacggttcccttcgtcgccaag
acgatcggcgcgccgattgccaagattgccgctcgcgtgatggccggtgaaaacctggac
gatgcgatcgccgcctatggcaagaagccggatccgcgcaacctcaagcatattgccgtc
aaggaagccgtgttcccgtttgcccgcttcccgggcgtcgacacgctgctcggtccggaa
atgcgctccaccggcgaagtgatcggcctcgacaccgactatgcgctggccttcgccaag
tcccagctgggcgccggcgtcgacttgccgcgcgacggaacggtcttcgtctctgtacgt
gacgaggacaaggtacgggtgctgccggccatccgcgttctcgcggatatcggtttcaag
gtcgtggcgaccggcggcacggcacggttcctgggcgagcacggcatcaccgccaccaag
atcaacaaggtgctcgaggggcggccgcacgtcgaggacgccattcgcaaccgccaggtc
cagcttgtcatcaacaccacggacggcaacaaggcgatctccgactcgaagtcgctccgc
cgtgcgaccctgatgcagaaggtcccctactacacgaccatggccggagctgaagctgcg
gctcacgccatcaaggcgctgaaggcgggcaacctcgaagtccgtccgctgcagagctat
ttcgacgcttga
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