Sinorhizobium fredii NGR234: NGR_c16090
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Entry
NGR_c16090 CDS
T00888
Name
(GenBank) lipoprotein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhi01011
]
NGR_c16090
Enzymes [BR:
rhi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NGR_c16090
Peptidoglycan biosynthesis and degradation proteins [BR:
rhi01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NGR_c16090
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
ACP25375
UniProt:
C3MD56
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All DBs
Position
complement(1660101..1661141)
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AA seq
346 aa
AA seq
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MGQMTSDRKAAYLAGGIRLAAVPLLCAALAACGSASSVKTSKSRSKEYFAESVYGVKASP
RVATGRNIPKGGGRYQVGKAYQVKGKWYQPKEDFGYNKSGMASWYGSAFHGRLTANGEVY
DKYHLSAAHPTFPLPSYARVTNMENGTSVIVRVNDRGPYEYGRIIDVSSKTADMLDMKRK
GSAKVRVQYVGRAPLEGNDMPYLMASYVTKGDRSPGVRPEGQIATGVMVASNEPLRNQVQ
DLGTVTVPAKSRLDTGVPVNALAAPAQALPTPRAMTEFVLLPEIGPIPTERPELIPLPDG
SMAYAAAYVEVRVSDKESPFEAIMVDSNPLTPESILAYAKRHEGAI
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
gtgggacaaatgacatccgatagaaaagcggcataccttgcggggggaatacggctcgct
gccgttccattactgtgcgcggcgcttgccgcctgcggatcggcttccagtgtcaagacg
agcaaatcgcgaagcaaggaatacttcgccgaatccgtctatggcgtcaaagccagcccc
cgggtcgccacaggacgcaacattccaaagggtggtggccgttaccaggtgggcaaggcc
tatcaggtcaagggcaaatggtatcagccgaaagaggatttcggctacaacaagtccgga
atggcctcctggtacgggtcggccttccatggccgtctgacggcgaacggcgaagtttac
gacaagtatcacctctcggccgcgcacccgactttcccgctgccgagctatgcccgcgtc
acaaacatggagaacggaacgtcggtcatcgtgcgcgtcaacgatcgcggtccctatgaa
tatggccggatcatcgatgtatcctcgaagacagcggacatgctggacatgaagcgcaag
ggaagcgccaaggttcgcgtgcaatatgtcggccgcgccccgctcgagggcaatgacatg
ccctatctcatggcgtcctacgtcaccaaaggcgatcggagccccggtgtaaggccggaa
ggacaaatcgcgacgggtgtcatggtcgcctcgaacgagccgctgcgcaatcaggttcaa
gacctcggcactgtcactgttccggccaagtcgaggcttgatacaggcgtcccggtgaat
gcgcttgccgcgccggcgcaagccttgccgacgccgcgcgccatgaccgaattcgtgctg
ctgccggagatcgggccgatcccgaccgagaggcccgaattgatcccgctgccggacggc
agcatggcttatgctgccgcctatgtcgaagtgcgggtcagcgacaaggagtcgcccttc
gaagcgatcatggtcgattccaatccgctgacgccggaatcgatccttgcctatgcaaag
cggcatgaaggcgccatctga
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