Sinorhizobium fredii NGR234: NGR_c16440
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Entry
NGR_c16440 CDS
T00888
Name
(GenBank) transcriptional regulator, AraC type
KO
K13652
AraC family transcriptional regulator
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_c16440
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
NGR_c16440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GyrI-like
HTH_18
Cass2
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ACP25409
UniProt:
C3MD90
LinkDB
All DBs
Position
complement(1688417..1689265)
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AA seq
282 aa
AA seq
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MTGSAWATYERRLHRVAAYIYGHLDEELDLDRLSEIACLSPHHWHRIYRVVHGETLAATV
KRLRLQRAAAQLVQTDLAVEAIARRSGYPNVQSFNRTFKAVYGLPPARYRREGSHTAFET
ASMEGNNVMYDVALRTIDPLTLMGVAHSGSYMGIGQAFETLYGTLFARGLFRPDMEMIGI
YLDDPELVETDRLRSFACVTTRDEGAAEAPLTRQKIDGGDYAVLRHKGPYADMPKAYQWL
YGTWLPNSGREIRDSVMFEKNLNNPREVAPTELLSEIYLPLK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgacgggcagtgcatgggcgacatatgagaggcggcttcatcgcgtcgcggcctatatt
tacgggcatctcgatgaagaactggatctcgaccgattgtcggagattgcctgcctgtcg
ccgcaccactggcaccgcatctaccgggtggtgcatggcgagaccttggcggcaaccgtc
aagcgattgcgtctgcagcgggcggcggcacaactcgtccagaccgaccttgcagtcgaa
gcgattgcacgacgctctggctacccgaatgttcaatccttcaaccgcaccttcaaggcc
gtctatggccttccgccggcgcgctacaggagagaggggagccacacggcctttgaaacc
gcttcgatggaaggaaataatgtcatgtacgacgttgcattacggacgatagatccgctg
acgctcatgggcgtggcccattccggctcttacatgggcatcggccaggcattcgaaacg
ctctacggcacgcttttcgcgcgcggcctgttcaggccggatatggaaatgatcggcatc
tatctggatgacccggaactggtggagacagacaggctccgatccttcgcctgcgtgacg
acaagggacgagggggcggcggaggctccgctcacccgacaaaagatcgacggcggagat
tatgcggtgttgcggcacaagggcccctacgccgacatgccgaaggcctatcaatggctc
tatgggacctggctgccaaactccggccgggaaatccgcgacagcgtcatgttcgagaaa
aatctcaacaatccacgcgaagtggctccaacggaattgctttcggaaatctatctgccg
ctgaagtga
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