Sinorhizobium fredii NGR234: NGR_c16890
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Entry
NGR_c16890 CDS
T00888
Name
(GenBank) transcriptional regulator NgrR, LuxR family
KO
K19733
LuxR family transcriptional regulator, quorum-sensing system regulator SinR
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c16890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_c16890
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NGR_c16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ACP25454
UniProt:
C3MDD5
LinkDB
All DBs
Position
1744576..1745310
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AA seq
244 aa
AA seq
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MTNQQAVLDLLDIVEYRGCADPQQFFALMRRTFDIAHLLYLEAEPTAEGLKVCRLHHTFG
AYAEELYLSRGLHRIDPILRLALGGVRPVEWATARRRFPECEPLYEAAEDIGLSTEGVAL
PLPSPAGRMALLAISANMSPPEWAEYRRCHLRDFQLAANLFHASMLEQAMADAIDDRDTR
LTSRETEVLTWSAAGKSYWEIATILGISERTVRFFMSNARRKLNVVSNTQAVAQAVRHAL
IPTI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaacaggctgtcctcgatctgctggatatcgtggaatatcgcgggtgcgcg
gacccgcaacagttcttcgccttgatgcgtcgcacgttcgatatcgcgcatctgctctat
ctcgaagcggagccgacggccgaggggctcaaggtctgccgcctgcatcacaccttcggc
gcctatgccgaggagctctatctgtcccgcggtctccaccgtatcgatccgatcctccgg
ctcgcgcttggcggcgtgaggcccgtggaatgggcgacagcgcggcgccgcttcccggag
tgcgaaccgctttacgaggctgccgaggatatcggcttgtccacggaaggcgtcgctctg
ccgctgccctcgccggccggacgcatggcactgctggcgatcagtgccaacatgtcgccg
ccggaatgggccgagtatcgtcgatgccatctgcgcgatttccagctggcggccaatctt
tttcatgcctcgatgctcgagcaggcgatggcagatgcgatcgacgaccgcgacacgcga
ttgaccagccgggagacggaggtcttgacctggtcggcggcgggcaagagctattgggaa
atcgcgacgatccttggcatttccgaacgcacggttcgcttcttcatgagcaatgcgcgc
cgcaagctcaatgtcgtgtccaacacccaagccgttgcgcaggcggtccgccatgcgctg
atccccaccatctaa
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