Sinorhizobium fredii NGR234: NGR_c17270
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Entry
NGR_c17270 CDS
T00888
Name
(GenBank) putative AsnC family transcriptional regulator
KO
K05800
Lrp/AsnC family transcriptional regulator, cysteine-sensing transcriptional activator
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_c17270
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
Lrp/AsnC family
NGR_c17270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg
HTH_24
HTH_AsnC-type
NirdL-like_HTH
HTH_11
MarR
HTH_20
HTH_Tnp_ISL3
HTH_Crp_2
HTH_DeoR
HTH_IclR
DDRGK
HxlR
MarR_2
HTH_27
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ACP25491
UniProt:
C3MDH2
LinkDB
All DBs
Position
complement(1786256..1786744)
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AA seq
162 aa
AA seq
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MDRLDRKILRLLQEDSTLAVADLAKKVGLSTTPCWRRIQKMEEDGVIRRRVALLDPVKVN
TKVTVFVSVRTSAHSMEWLRRFSEVVADFPEVVEFYRMSGDVDYLLRVVVPDIAAYDAFY
KRLIAKIEIRDVSSAFAMEQIKYTTQLPLDYMVIDQAKSSDD
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
atggatcgtctggaccgcaagatcctgcgtcttctgcaggaggactcgactttggccgtt
gccgacctcgccaagaaggtcgggctttcgacgacgccatgctggcggcgcatccagaag
atggaagaggatggcgtcattcgccgccgcgtcgcgctgctcgatccggtcaaggtcaac
accaaggtgacggtgttcgtctcggttcgaacgagtgcccactcgatggaatggttgcgt
cgcttttccgaagtcgttgccgattttccggaagtggtggaattctaccgcatgagcggc
gacgtcgactatctgctgcgcgtcgtggtgccggatattgccgcctatgacgccttctac
aaacggctgatcgccaaaatcgagatccgcgacgtctcgtcggcctttgccatggagcag
atcaagtacacgacgcaattgccgctcgactacatggtcatcgatcaggcgaagtcgagc
gacgactag
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