Sinorhizobium fredii NGR234: NGR_c17670
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Entry
NGR_c17670 CDS
T00888
Symbol
xynA
Name
(GenBank) beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00520
Amino sugar and nucleotide sugar metabolism
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NGR_c17670 (xynA)
Enzymes [BR:
rhi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
NGR_c17670 (xynA)
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
ACP25531
UniProt:
C3MDL2
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Position
complement(1823978..1825603)
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AA seq
541 aa
AA seq
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MTAMIRNPILPGFNPDPSICRVGDDYYIATSTFEWYPGVQIHHSRDLVNWRLVRRPLERA
SQLDMRGNPDSCGIWAPCLSYCDGLFWLVYTDVKRFDGNFKDAHNYIVTAEAVEATWSDP
VYVNSSGFDPSLFHDDDGRKWFLNMQWNHRSESFGGAPKHPAFDGILLQEWDERSRKLVG
PVKNIFAGSSLGLVEGPHLFKRDGWYYLTTAEGGTGYDHAVTMARSRSIHGPYDIHPNAH
LITSKDHPEAALQRAGHGQYVETPDGQAYHTHLCGRPLPPHRRCTLGRETALQKCVWRED
GWLYLENGGVVPEVIVPAPAETSSVPLPAVIETDFDEGVLAPEFQWLRTPMPERIFSLQR
REGHLRLFGRESIGSWFEQALVARRQDHHSFRAETVVDFAPHTYQQVAGLTHYYNRHKFH
ALGVTWHEMLGRVVTILSCPGDFPHGRLQYPAGSGVAVPDGPVQLAMEVRDNDLQFFWRE
ATQADWQPIGPVLDAGVVSDEGGRGEHGSFTGAFTGMFAFDTSGSAMTADFDRFRYEALG
L
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgatgatccgcaatccgatcctgccgggcttcaatcccgacccgtcgatctgc
cgggtgggcgacgattactacatcgcgacctctacattcgagtggtatcctggcgtgcag
atccaccactcgcgcgatctggtgaactggcgtctcgtccgtcggccgctggagcgggcg
agccagctcgacatgcgcggcaaccccgacagttgcgggatatgggcaccgtgcctttcc
tattgcgacgggctgttctggctcgtctatacggacgtcaagcgcttcgacggcaacttc
aaggacgcgcacaactacatcgtcacggccgaagcggtcgaggcgacgtggtccgatccg
gtctatgtcaactcgtcgggcttcgacccgtcgctgttccatgacgacgacggccgcaag
tggttcctgaacatgcagtggaaccaccgctctgagagcttcggcggcgcgccgaagcat
cccgccttcgacggcatcctgctgcaggaatgggacgagcggtcccgcaagctggtcggc
ccggtcaagaacatcttcgccggcagttcgctcggtctcgtcgaggggccgcatctcttc
aagcgtgacggctggtactacctcaccacggccgaaggcggaacgggctacgaccacgcc
gtcaccatggcgcgctcccggtcgatccatggcccgtatgacatacatccgaacgcccac
ctcatcacgtcgaaggatcatccggaagcggccctgcaacgggccggccacggccaatat
gtcgagacgccggacgggcaggcctatcacacccatctttgcggccgtccgctgccgccg
catcgccgctgcacgcttggccgcgaaacggcgctgcagaaatgcgtctggcgggaggac
ggatggctctatctggagaacggcggtgtcgtgccagaggtgattgtaccggctccggcc
gagacgagctctgtgccgctacccgctgttatcgagacggatttcgacgagggagtgctt
gcacccgagtttcaatggctgcgcaccccgatgccggagcggatcttttcgctgcagcgg
cgggaaggccacttgcgcctgttcggccgcgaaagcatcggcagctggttcgagcaggcg
cttgtcgccagacgccaggaccatcactccttccgcgccgagaccgtggtcgacttcgcg
ccccacacctaccagcaggtcgcgggcctgacgcattactataaccgccacaagttccat
gctctcggcgtcacctggcacgagatgctcggccgcgtcgtcaccatcctttcatgcccg
ggagatttcccgcacgggcgcttgcagtacccggccggcagcggcgtcgcggtcccggac
ggcccggtgcaactggcgatggaagtgagggacaacgacctccaattcttctggcgggag
gcgacgcaggcggattggcagccgatcggccctgtgctcgacgccggcgtcgtctcggac
gagggcgggcgcggcgagcacggttccttcaccggcgcttttaccggcatgttcgccttc
gatacgtccggcagtgcgatgaccgctgacttcgaccgttttcgatatgaggcgcttggc
ttatga
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