Sinorhizobium fredii NGR234: NGR_c18120
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Entry
NGR_c18120 CDS
T00888
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein cobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00860
Porphyrin metabolism
rhi01100
Metabolic pathways
rhi01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NGR_c18120 (cobD)
Enzymes [BR:
rhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
NGR_c18120 (cobD)
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Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
ACP25576
UniProt:
C3MDQ7
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Position
complement(1868323..1869303)
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AA seq
326 aa
AA seq
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MSIEIFLVLVVALIIDRLVGDPDWLWERLTHPVVFFGKAIGVFDEALNRGADGGWLKMRG
VATILILLAASILLGVVLNRLFDVLGAVGFILEAITVAVFLAQKSLADHVRRVADGLRSN
GLEGGREAVSMIVGRDPKTLDEPGVCRAAIESLAENFSDGVVAPALWYAVAGLPGLLAYK
MLNTADSMIGHKSPKYLHFGWASARLDDLANLPAARLSVFLIAAGARFKRGVEAAKAAID
VAKRDHGFHRSPNSGWPEAAMAGALDIQLAGPRVYGGVTVDEPMINGAGRAIATADDIDA
AVAVFYRACTTLAAASAVLVLPFLLL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcgaaatatttctcgttctcgttgtcgccctgattatcgatcgtctcgtcggc
gatccggactggctctgggagcggctgacgcatccggtggtgttcttcgggaaggcgatc
ggcgttttcgacgaggcgctcaatcgcggcgcggacggtggctggctgaagatgcggggc
gttgcgacgatcctcattctcctcgcggcaagcatcctgctcggtgtggtgctcaatcgt
ctgttcgatgttctcggcgctgttggcttcatcctcgaggcgatcaccgttgccgttttc
ctagcccagaagagcctcgccgatcacgttcgccgggtcgctgacggcttgcgcagtaat
ggtctggaagggggacgggaggccgtgtcgatgatcgtcggccgcgatcccaaaacgctc
gacgagcccggcgtttgccgggcagcgatcgaaagccttgcggaaaatttttccgatggt
gtcgtcgcgcccgccctctggtatgcggtggcggggcttcccggcctccttgcctacaag
atgctgaacacggccgattcgatgatcggccataaaagcccgaaatatcttcatttcggc
tgggcttcggcgcggctcgacgacctcgccaacctgccggccgcacgactttcggtgttc
ctgattgccgccggagcccgtttcaagcgcggcgtcgaggcggcaaaggccgcaatcgac
gtggcaaagcgcgaccatggctttcaccgctcgcccaattccggctggcccgaggcggcg
atggcgggcgcgctcgatattcagcttgccggtccgcgtgtttacggtggggtcacggtg
gacgagccgatgatcaacggcgccggccgggccattgcaacggcagacgatatcgacgcc
gccgtggcggtcttctatcgtgcctgcaccacgcttgctgcggcctccgccgtattggtc
ctgcccttcctgcttttgtga
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