Sinorhizobium fredii NGR234: NGR_c18190
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Entry
NGR_c18190 CDS
T00888
Symbol
cobN
Name
(GenBank) Aerobic cobaltochelatase CobN subunit
KO
K02230
cobaltochelatase CobN [EC:
6.6.1.2
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00860
Porphyrin metabolism
rhi01100
Metabolic pathways
rhi01240
Biosynthesis of cofactors
Module
rhi_M00925
Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NGR_c18190 (cobN)
Enzymes [BR:
rhi01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.2 cobaltochelatase
NGR_c18190 (cobN)
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
Thrombin_light
Motif
Other DBs
NCBI-ProteinID:
ACP25583
UniProt:
C3MDR4
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Position
complement(1874929..1878954)
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AA seq
1341 aa
AA seq
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MHLLLAQKGTIADGNEAIDLGQSPADILFLSAADTELASIAAAHRRRAGMKSLRIASLMS
LMHPMSVDTYVERTARHAKLIVVRPLGGASYFRYVLEALFAAAVAGKFQIAVLPGDDKPD
PGLEPFSTVSADDRQRLWAYFTEGGADNASLFLDYAEALIDGGEKPQPARPLLKAGIWWP
GRGVIGVGEWMRLVRGRGDAPPEAVTLPTVAICFYRALVQSGETKPVEALIDALAAEGMR
ALPVFVSSLKDQVSIGTLVAIFAEAAPDVVLNATGFAVSAPGADRQPTVLESTGAPVLQV
IFSGSSREAWEASPQGLMARDLGMNVALPEVDGRILSRAVSFKAASVYDPLVETNIVGHE
PLADRVRFAARLAANWARLRRAKPQVRRVAIVMANYPNRDGRLGNGVGLDTPAGTIEVMR
AMAAEGYTVGDLPEDGDALIRFLMAGPTNAASRDREIRETISLSEYKDFLASLPKKIQQE
VSERWGAPETDPFFLDDVFALPLARFGDVLVGVQPARGYNIDPKETYHAPDLVPPHGYLA
FYAHLRQVFGADAIIHMGKHGNLEWLPGKALALSEACYPEAVFGPTPHLYPFIVNDPGEG
TQAKRRSSAVIIDHLTPPLTRAESYGPLKDLEALVDEYYEAAGGDPRRLRLLSRQILDLV
RDIGLDNDAGIEKGDSDDKALEKLDAYLCDLKEMQIRDGLHIFGVAPEGRLLTDLTVALA
RVPRGLGEGGDQSLQRAIAADSGLGVSGQGTPSALPGISPTRGESDSRLPLAATTPSEPA
APPEVAGSISNLTVDGERAVASVLSPLVGEMPGRAEGVLAPHTQPFDPLDCVMSAPWTGP
KPDLLATLSDAPWRTAGDTVERVELLAAKLVSGEVACPYDWTNTRAVLDEIEARLKPSIQ
DSGAAEIEGLLTGLDGRFVAPGPSGAPTRGRPDVLPTGRNFYSVDSRAVPTPAAYELGKK
SAELLIRRYLQDHGEWPSSFGLTAWGTSNMRTGGDDIAQALALIGAKPIWDMASRRVTGY
EIVPLAVLGRPRVDVTLRISGFFRDAFPEQIALFDKAIRAIGALEEDDADNMIAARMRAE
ARRLEEKGVEPKKAARRASYRVFGAKPGAYGAGLQALIDEKGWEKRGDLADAYLTWGGYA
YGAGEDGKAERGLFEERLSTIEAVVQNQDNREHDLLDSDDYYQFEGGMSAAAEHLKGQRP
AIYHNDHSRPEKPVIRSLEEEIGRVVRARVVNPKWIDGVMRHGYKGAFEIAATVDYMFAF
AATTGAVRDHHFEAAYRAFIADEKVLDFLRDKNPAALAELADRFLEAVDRDLWNPRSNSA
RFELNSLSGRAANERLQAGNE
NT seq
4026 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttctcctagcccagaaaggaacgatcgccgacggcaacgaggcgatcgatctc
ggccaaagcccagccgatatcctgttcctgtcggccgccgataccgagcttgcttcgatt
gcggccgcccatcgccggcgcgcaggaatgaagagtctgcgcatcgccagcctgatgagc
ctcatgcatccgatgtcggtcgacacctatgtcgagcgcacggcgcgccatgcgaagctg
atcgtcgtccggccgctcggcggcgccagctattttcgatacgtgctggaggcgcttttt
gcggcggcggtcgccggcaagttccagattgccgtacttccgggagacgacaagccggat
cccggtcttgagcctttttcgactgtttcggccgatgaccgccagcgtctctgggcctat
ttcaccgagggcggcgccgacaatgccagcctgttcctcgactatgccgaggcgctgatc
gacggaggcgaaaagccgcagccggcgcgcccgttgctcaaggccggcatctggtggccg
ggcaggggtgtgatcggggtcggtgagtggatgcggcttgttcgaggacgaggggatgca
cccccggaggcggtaaccctccccaccgtcgccatctgcttctaccgcgccctcgtccag
agcggtgagaccaaacccgttgaggcattgattgacgcgctggcggctgaaggcatgcgt
gcactcccggtgttcgtctcgagcctcaaggaccaggtctcgatcggcacgcttgtagcg
atcttcgcggaagccgcgcccgacgttgtcttgaacgccacgggcttcgccgtctcggcg
cccggcgccgaccggcagccgaccgtcttggaatcgaccggcgcaccggtgctgcaggtc
atcttttcaggatcgtcccgcgaggcgtgggaagcctcgccgcagggtctgatggcccgc
gatctcggcatgaatgtcgctctgccggaggtggacggccgcattctttcgcgcgccgtc
tccttcaaggcggcatcggtttacgacccgctcgtcgaaaccaacatcgtcgggcacgag
ccgcttgccgatcgcgtccgctttgccgcccggcttgccgccaactgggcgaggctgcgc
cgggcgaagccgcaggtgcgccgggtcgccattgtcatggccaattatccgaaccgcgac
ggccgtctcggcaacggcgtcggcctcgatacgcccgccggcacgatcgaagtcatgaga
gcgatggcggcggaaggctacacggtcggcgatctgcctgaggatggcgatgcgctgatc
cggttcctgatggccggaccgaccaatgcggcgagccgtgatcgggaaatccgcgaaaca
atttccctgagcgagtacaaggatttcctcgcctctcttccgaaaaagattcagcaggag
gtgagcgagcgctggggtgcgccggagaccgatcccttcttcctcgatgacgttttcgcg
ctgccgctcgcccggttcggcgacgtcctggtcggcgtacagcccgcccgcggctacaat
atcgatccgaaggaaacctatcacgctccggatctcgtgccgccgcacggctatctcgcc
ttctacgcccatctgcgccaggtcttcggtgccgacgcgattatccacatgggcaagcac
ggcaacctcgaatggctgccaggcaaggcgctggcgctttccgaggcctgttatccggag
gcggtgttcggtccgacaccgcatctctatcccttcatcgtcaacgatccgggcgagggc
acgcaagcaaagcgccgcagcagcgcggtgatcatcgaccatctgacgccgcccttgacg
cgggccgagtcctacggtccgctgaaggacctcgaagcgctggtcgacgagtattacgag
gcggccggcggcgatccacggcggctgcggttgctcagccgccagatcctcgatctcgtg
cgcgatatcggcctcgacaacgacgccggcatcgaaaagggcgatagcgacgacaaggcg
ctcgaaaagctcgacgcctatctctgcgacctcaaggagatgcagatccgcgacgggctg
cacatcttcggcgtcgcgccggaggggcgactgttgacggatctcaccgtggctctcgcc
cgggtgccgcgcggtttgggtgagggcggggaccagagtttgcagcgggcgattgcggcg
gattcggggttgggtgtttcggggcaaggcaccccctctgccctgccgggcatctccccc
acaaggggggagagtgactcgcggctaccactcgcagccacaactccctcagaacccgca
gcgccgccggaagttgcaggaagcatctccaatttgacagtcgatggggagcgagcggtg
gcatccgtcctctccccccttgtgggggagatgcccggcagggcagagggggttcttgct
ccccacacgcaacctttcgaccccctcgactgcgtcatgtcagcgccctggaccggcccg
aagcccgatctcctcgccaccctctccgatgccccgtggcgcaccgcgggcgacacagtc
gagcgggtcgaacttctcgcggcgaaactggtgtcgggcgaggttgcctgcccttacgat
tggaccaacacgcgcgccgtcctcgacgagatcgaggcacggctgaagccttcgatccag
gattcgggtgcggcggagatcgagggcctcctcaccggcctcgacggccgcttcgtcgcg
cccggaccttccggcgcgccgacccgcggacgtcccgacgtgctgccgaccggccgcaac
ttctattccgtcgacagccgcgccgtcccgacgccggcggcctacgagctcggcaagaaa
tcggccgagctgctgatccgccgctatctgcaggatcacggcgaatggccgtcgtccttc
gggctcaccgcctggggaacgtccaatatgcgcaccggcggtgacgatatcgcccaggcg
ctggcgctgatcggcgccaagccaatctgggacatggcgtcgcgccgcgtcaccggctac
gagatcgtgccgcttgccgtgctcggccggccgcgcgtcgacgtgacgctcaggatatcc
ggtttcttccgcgacgccttcccggaacagatcgccctcttcgacaaggcgatccgcgcg
atcggcgcgctcgaggaggacgatgccgacaacatgatcgccgcccggatgcgcgccgag
gctcggcggctcgaggaaaagggtgtcgagccgaagaaggcggcgcgccgcgcctcctac
cgcgtcttcggcgcgaaaccgggtgcctacggcgcgggcctgcaggcgctgatcgatgaa
aaaggctgggagaagcgcggcgatctcgccgacgcctatctcacctggggcggctatgcc
tatggcgccggcgaagacggcaaggcggagcgcgggcttttcgaggagcgcctcagcacc
atcgaggccgtcgtccagaaccaggacaaccgcgagcacgatctgctcgacagcgacgac
tactaccagttcgaaggcggcatgagcgccgcggcggaacatctcaaggggcaacgcccg
gcgatctatcacaacgaccactcccggccggagaagccggtgatccgctcgctggaggag
gagatcggccgcgtggtgcgagcccgcgtcgtcaatccgaaatggatcgacggggtcatg
cgccacggctacaagggcgccttcgagatcgccgcgacggtcgactatatgttcgccttc
gcggcgacgaccggggcggtgcgcgaccatcatttcgaggctgcctaccgggccttcatc
gccgacgagaaggttctcgatttcctgcgtgacaagaaccctgctgcccttgccgagctc
gccgatcggttcctggaggctgtcgatcgcgatctgtggaacccgcgctccaactcggcg
cgatttgaactgaacagcctgtccggccgtgccgcgaacgaacgcctgcaggccggaaac
gaatag
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