Sinorhizobium fredii NGR234: NGR_c21620
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Entry
NGR_c21620 CDS
T00888
Name
(GenBank) putative substrate-binding component of ABC transporter protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c21620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c21620
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_c21620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
DUF6086
YqhI
Motif
Other DBs
NCBI-ProteinID:
ACP25923
UniProt:
C3MET2
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All DBs
Position
2231736..2233325
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AA seq
529 aa
AA seq
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MSDYKDYLTRQVMLGKINRREFLGRAAALGIAASTANTLFAVSAAAQEPKRGGHLKLGLE
GAAATDSKDPAKALSQFLFVVIRNWGDLLVETHPTTGAAVPALAESWEPSADAATWTFAI
RKGVKFHDGKELTVEDVVKTLQRHTDDKSESGALGVMKSIKEIKADGGKLVLTLTEGNAD
LPLLLSDYHLVIQPNGGMDNPDAMIGTGPYKVASFEPGVRATFERNQDDWRTDRGYVDTV
ELIAMNDATARIAALSSGQVHFINRVDPKTVSLLKRAPTVEILNTSGRGHYVFIMHCNTA
PFDNNDLRMALKLAMDRETMVQRILGGYGKIGNDFPINDTYALFPEGIEQRVYDPDKAAF
HYKKSGHSGPVLLRTSDVAFPGAVDAAVLYQESAKKAGIEIEVKREPGDGYWTNVWNAQP
FCTSYWGGRPTQDQMYSTAYLSNADWNDTRFQREDFDKLLLQARSELDEPKRKDMYRTLA
MMVRDEGGVILPMFNDFVNASTKQVKGYVHDIGNDMSNGYVATRVWLDA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattacaaggattatctgacacgacaggtcatgctgggcaaaatcaaccggcgc
gaatttctcggacgggcggctgccctcggcatcgccgcatcgactgcgaacacgctgttt
gcggtgagcgccgcggcgcaggagccgaaacgcggcgggcaccttaagcttggcctcgaa
ggcgcggccgcaaccgattcgaaagacccggcaaaggcgctttcacaattcctgttcgtc
gtcatcagaaactggggcgacctgctcgtcgaaacccacccgacgaccggtgcggccgta
ccggcgcttgcagagtcctgggagccttccgccgacgcggcgacatggaccttcgcgatc
cgcaagggcgtcaaattccatgatggcaaggaactgacggtagaggacgtcgtcaagacg
ctgcagcgtcacacggacgacaagtcggagtcgggcgcccttggcgtgatgaaatccatc
aaggaaatcaaggccgatggcggcaagctcgtgctgacgctgaccgaaggcaatgccgac
ctgccgctgctgctttcggattatcacctcgtcatccaaccgaacggcggtatggacaac
cccgacgccatgatcggcaccggtccctacaaggtcgcgagcttcgaaccgggcgtgcgt
gccactttcgaaaggaaccaggacgactggcgcacggatcgtggctatgtggacacggtc
gaactgatcgccatgaacgatgcgacggcgcgcatcgccgcgctttcgtccggtcaggtg
cactttatcaaccgcgtcgatccgaagacggtcagcctcctgaagcgcgcgccgaccgtg
gaaatcttgaatacatccggccgcggccactacgtcttcatcatgcattgcaacaccgcg
ccgttcgacaacaacgacctcaggatggcgctgaagctggcgatggatcgcgagaccatg
gttcagcgcatcctcggcggttacggcaagatcggcaacgacttcccgatcaacgacacc
tatgccctcttcccggaaggcatcgagcagcgtgtctatgatccagacaaggccgccttc
cactacaagaagtcgggccacagcgggccggtgctgctgcgcacctccgacgtcgccttc
ccgggcgcggtggatgccgccgttctctaccaggaaagcgccaagaaggccggcatcgag
atcgaggtcaagcgcgagccgggcgacggctactggaccaacgtctggaacgcccagcca
ttctgcacctcctattggggcgggcgcccgacgcaggaccagatgtactcgaccgcctat
ctttcgaacgccgactggaacgacacccgcttccagcgtgaggacttcgacaagctcctg
ctccaagcgcgttccgaactggacgagcccaagcgcaaggacatgtatcgcaccctggcg
atgatggtgcgggacgaaggcggcgtgatcctgccgatgttcaatgacttcgtgaacgcg
tccaccaagcaggtgaagggctacgtccacgacatcggcaacgacatgtcgaacggctat
gtcgcaacccgggtgtggctggacgcctga
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