Sinorhizobium fredii NGR234: NGR_c21690
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Entry
NGR_c21690 CDS
T00888
Name
(GenBank) putative ABC transporter periplasmic binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c21690
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c21690
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_c21690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Ral
Motif
Other DBs
NCBI-ProteinID:
ACP25930
UniProt:
C3MET9
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All DBs
Position
2241219..2242379
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AA seq
386 aa
AA seq
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MKQILKSCTALTLTLGLVAPALAQEPLKELGQGEGQLSIVAWPGYIERGETDKSYDWVTE
FEKKSGCKVSVKTAATSDEMVALMNEGGFDLVTASGDASLRLVAGKRVQPINTALIPSWK
TIDERMQNAPWHTVNDVHYGTPYVWGPNVLMYNTEAFKGQPPKSWNVVFEEMTLPDGKSN
KGRIQAYDGPIHVADAANYLMAHKPELGIKDPYELNEEQYKAALDLLRVQRTLVGRYWHD
AMIQIDDFKNEGVVASGTWPFQVNLMLAEKQPIESVFPEEGVTGWADTTMLHADSEHPNC
AYMWMEHTLAPKVQGDVSAWFGANPSVGAACKGNELLTDEGCQANGYNDFDKVKFWKTPV
AKCASQSECVPYHRWVSDYIGVIGGR
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagatcctgaaatcctgcacggcgcttacccttacgctcggcctcgtcgccccg
gcgcttgcccaggagccgctgaaggagctcggccagggtgaaggccaactgtcgatcgtc
gcctggcccggctacatcgagcgcggcgaaaccgacaagagctacgactgggtgaccgaa
ttcgagaagaagtcgggctgcaaggtcagcgtcaagaccgccgcgacctccgacgaaatg
gtcgcgctaatgaatgaaggcggcttcgacctcgtcaccgcttcgggcgacgcctcgctt
cgcctggtggccggcaagcgcgttcagccgatcaacaccgccctcattccgagctggaag
acgatcgacgagcgcatgcagaacgcaccctggcatacggtcaacgacgtgcattacggt
acaccctatgtgtgggggccgaatgtgctgatgtacaacacggaggccttcaaggggcag
ccgccgaaaagctggaacgtcgtcttcgaggaaatgacgctgccggacggcaagtccaac
aagggtcgtatccaggcctatgacgggccaatccatgtcgccgacgcggccaattacctg
atggcccacaagcccgagctcggcatcaaggacccttacgagctcaacgaagagcagtac
aaggccgccctcgatctgctgcgcgtccagcgcaccctcgtcggccgctactggcacgac
gcgatgatccagatcgacgacttcaagaatgagggcgtcgtcgcctccggcacctggccg
ttccaggtcaaccttatgctggcagaaaagcagccaatcgagtcggtcttcccggaagaa
ggagtgacgggctgggccgacacgaccatgctgcatgccgacagcgagcatccgaactgc
gcctatatgtggatggagcacacgctggcgccgaaggtccagggcgatgtatccgcctgg
ttcggcgccaatccctcggtcggggcggcctgcaagggcaacgagcttctgacggatgag
ggctgccaggccaatggctacaacgacttcgacaaggtcaagttctggaagacgccggtc
gccaaatgcgcaagccagagcgaatgcgtgccctatcaccgctgggtgtccgactatatc
ggcgtgatcggcggacggtaa
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