Sinorhizobium fredii NGR234: NGR_c22710
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Entry
NGR_c22710 CDS
T00888
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGR_c22710 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhi03019
]
NGR_c22710 (recQ)
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c22710 (recQ)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NGR_c22710 (recQ)
Messenger RNA biogenesis [BR:
rhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NGR_c22710 (recQ)
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NGR_c22710 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HHH
Motif
Other DBs
NCBI-ProteinID:
ACP26030
UniProt:
C3MFH3
LinkDB
All DBs
Position
complement(2355627..2357582)
Genome browser
AA seq
651 aa
AA seq
DB search
MRGKATDEAQVNSCPFSSNFSHTAPDESHSMPETPNTTARLFEPQGIVNPLDILKRIYGY
SAFRGQQQAVIEQVVAGGDAVVLFPTGAGKSLCFQIPALCRKGVGIVVSPLIALMRDQVE
ALKQLGIRAAGLNSSLTRDEAIAVRRALAADELDLLYVTPERAVTDGFAEMIGDMDIALF
AIDEAHCVSQWGHDFRPEYRGLDCLASRFPGVPRIALTATADHHTRDDIIERLALGGARV
FTSSFDRPNIAYEIVERDQPRQQLLRFLSRFKDSSGIVYCLSRAKVEDTAEWLSEQGIRA
LPYHAGMDRALRDRHQDAFLKEENLCLVATVAFGMGIDKPDVRFVAHLDLPGSVEAYYQE
TGRAGRDGLPSEVWMAYGMADVIQRRRMIDEGGAPDEIKRIERSKLNSLLAICETAGCRR
QAILAHFGEAHSGRCSHCDTCLKPVETWDGTEAAIKALAAVYRTGERFGTGHVIDVLMGT
VNEKTERFGHVDMPVFGAGKDLPARTWQSVFRQLLATGLITVDHAAFGAMKLEPEARAVF
KRERQVFFRKDRPSSGKAARGQKSTSARERSELAGSDLELFEKLRAERFSIAKELNVPPY
VVFPDTTLIALAKQRPRDFDDLLDIPGIGESKRERYGEAFLTVIDSFEDGG
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
gtgaggggcaaagctacagatgaggcgcaagtcaactcttgtccgttttcatccaacttt
tctcatactgcacccgacgaaagccattccatgcctgaaacgcccaacaccaccgcacgc
ctgttcgagccgcaaggcatcgtcaatcccctcgacattctcaaacgtatctacggctat
tccgccttccgcggccagcagcaggccgtaatcgaacaggtggtggcgggcggtgatgcg
gtcgtgcttttcccgaccggggccggcaagtcgctctgcttccagataccggcgctatgc
cgcaagggcgtcggcatcgtcgtctcgccgctgattgccctgatgcgcgatcaggtggag
gcgctgaagcagcttggcattcgcgctgccgggctcaactcttccctgacccgcgacgag
gcgatcgccgtccgtcgtgcgcttgcggcggatgaactggacctgctctacgtcacgccg
gagcgtgctgtcaccgacggcttcgccgagatgatcggcgacatggacatcgcgctcttc
gccatcgacgaggcacattgcgtctcccagtggggacacgattttcgacccgagtatcgc
ggccttgattgccttgcgtcgcgttttcccggcgtgccgcgcattgcgctgacggccacc
gccgaccaccatacgcgcgacgacatcatcgagcggctggcgcttggcggcgcgcgggtg
ttcacctcgagcttcgaccggccgaacatcgcctacgagatcgtcgaacgcgaccagccg
cgccagcagctgttgcgcttcctgtcgcgcttcaaggattcgagcggcatcgtctattgc
ctgtcgcgcgccaaggtcgaggacacggccgagtggctgagcgagcaaggcatccgtgcg
cttccctatcacgccggcatggatcgggctttgcgcgatcgtcatcaggacgctttcctg
aaggaggaaaatctctgcctggtggcgaccgtcgcctttgggatggggatcgacaagccg
gacgtgcgttttgtcgcgcatctcgacctgccgggctcggtcgaggcctattaccaggag
acgggaagggcagggcgcgacgggctgccatcggaagtctggatggcctatggcatggca
gacgtcatccaacggcggcgcatgatagacgagggcggggcgcccgacgagatcaagcgc
atcgagcgatccaagctcaattccctgctggcgatctgcgagacggccggctgccggcgc
caggcgatcctcgcgcatttcggcgaggcgcattccggccgctgcagccactgcgatacc
tgcctgaagccggtcgagacctgggacggcacggaagcggcgatcaaggcgctcgctgct
gtctaccggaccggcgagcggttcggcaccggtcatgtcatcgacgtgctgatgggaacc
gtcaacgagaagaccgagcgcttcggtcatgtcgacatgccggtcttcggtgccggcaag
gacttgccggcgcgcacgtggcaatcggttttccgccaattgctggccacgggcctgatc
acggtggatcacgccgcctttggtgccatgaagctcgaaccggaggcacgcgccgtcttc
aagcgcgagcggcaggtgttcttccgcaaggatcggcccagttccggcaaggcggcccgc
ggccagaaatcgacatcggcccgcgagcgctcggaattggccggctccgatctcgagctt
ttcgagaagctgcgggcggagcggttttcgatcgcgaaggaattgaacgtccccccctat
gtggtcttcccggacacgaccctgatcgcgctcgccaagcagcgaccccgcgatttcgac
gacctcctcgacatacccggcatcggcgaaagcaagcgggaacgttatggcgaggccttt
ctgacggtgatcgattcttttgaggacggcggctga
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