KEGG   Sinorhizobium fredii NGR234: NGR_c23100
Entry
NGR_c23100        CDS       T00888                                 
Symbol
gspD
Name
(GenBank) general secretion pathway protein D, GspD
  KO
K02453  general secretion pathway protein D
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NGR_c23100 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhi02044]
    NGR_c23100 (gspD)
Secretion system [BR:rhi02044]
 Type II secretion system
  General secretion pathway protein
   NGR_c23100 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0
Other DBs
NCBI-ProteinID: ACP26069
UniProt: C3MFL2
LinkDB
Position
complement(2391866..2393944)
AA seq 692 aa
MLAGCALENNDERWNSLMEGVGKPTNSSTYGYPASKAITGARRANSAPRGFAQVGTGEFT
GESLSAISAGKAADGSEGYTINLVDAPVAQAAKKILGDIMGYNYLVDPKVTGNITLQTSS
PMSRQSLLDILEVSLATNGAAIVKKADRYEIVPISEATASNAIIGPRVPMNEPGMKVQVL
QLNYIGADEMREIIEQVSKKGAVLRTDPTRNYIVVAGNNGELAAIREAISVFDVDWMKGM
STALYPLKASQPQELVKELNSVFGVDGGPNAKTIRFIPNTRLNAILAITSRPSYLPRVTS
WIAKLDKIAETNEEQLFVYEIQNRPAAELAKVLQSVLATGQAGGGTVVRQSVVAPDLVAE
TVAAGGEGAPMEMPPEAAVEAASAPVSSVPSVVADIENNALLISTTAREYQRIEQILRQL
DVLPTQVFLEAVIAEVSLNDELKFGLRWYFEHNSDAFGLSDLASGAVAATFPGFNWTHLA
GDAQIALQALSSVTNVKVISSPNLMVINNQQAKLQVGDQVPTVTQTSTSTSSADAAIVNS
VELKDTGIILAVTPRINSSGRVMLDIQQEVSNVVETTTSGIDSPTIQQRKISTRVVVNDG
ESLALGGLIQEKKSLGQKKMPVLGDIPLFGNAFKSKTDGINRTELIIFIRPRIVRDVQEA
RQVTDEFRQQFDFDRTDTPGRRMQRDLVRVAN
NT seq 2079 nt   +upstreamnt  +downstreamnt
atgctcgccggctgcgccttggagaataacgacgagcgctggaattcactaatggaaggt
gttggaaaaccaacgaattccagcacctacggctacccagcctccaaggcgatcaccggt
gcgcgccgcgcaaattccgcgccgcgcggatttgcgcaggtcggcacgggtgagttcacc
ggagaatcgctctctgcaatctccgctggcaaggcggcggacggatcggagggctacacg
atcaacctggtcgatgcgccggtcgcccaggccgccaagaagatcctcggcgacatcatg
ggctacaactacctcgtcgacccgaaggtcaccggcaatatcacgctgcagacatcaagc
ccgatgtcgcggcagagcctgctcgacatcctcgaagtgtcgctcgcgacaaacggcgcg
gcgatcgtcaagaaggccgatcgctacgagatcgtgccgatctccgaggcgaccgcctcg
aacgccatcatcggtccgcgggtgccgatgaacgagccgggtatgaaggtgcaggtgctg
cagctcaactatatcggcgccgacgagatgcgcgagatcatcgagcaggtgagcaagaag
ggcgcggtgctgaggaccgatccgacccgcaactatatcgtcgtcgccggcaacaatggc
gagcttgcggcgatccgcgaggcgatctcggtcttcgacgtcgactggatgaagggcatg
tcgacggcgctctatccgctcaaggcctcgcagccacaggagctggtcaaggagctcaat
tccgtcttcggcgtcgatggcggcccgaatgcgaagacgatccggttcatcccgaacacg
cggctgaatgccatcctggcgatcacctcgcggccgagctacctgccgagggtcacttcc
tggatcgccaagctcgacaagatcgccgagacgaacgaggagcagctcttcgtctacgag
atccagaaccgcccggcggccgagcttgcgaaagtcctgcagagcgtgctggcaacaggc
caggccggcggcggaaccgtcgtccggcaaagcgtcgttgcccctgatctcgtcgcggag
accgttgccgccggcggggaaggggctcccatggaaatgccgcccgaggccgcggtcgaa
gcggcaagcgcgccggtcagttcggttccctccgtcgttgccgatatcgagaacaacgcg
ttgctgatctcgaccaccgcacgggaatatcagcggatcgaacagatcctccgccagctc
gacgtgctgccgacccaggtcttcctggaagccgtgatcgccgaagtgagtctgaacgac
gaactcaaatttggcctgcgctggtatttcgagcacaacagcgacgccttcgggctatcg
gatcttgcatcgggtgccgttgcggccaccttcccgggcttcaactggacgcatctcgcc
ggcgacgcccagatagcgctgcaggcgctctccagcgtcaccaacgtcaaggtgatttcc
tcgccgaacctgatggtgatcaacaaccagcaggcgaagctccaggtcggcgaccaggtg
ccgacggtcacgcagacgagcaccagcacgtcctccgccgatgcggcaatcgtcaactcc
gtcgagctcaaggacaccggaatcattctcgcggtcacgccgcggatcaacagttccggc
cgcgtcatgctcgacatccagcaggaggtcagcaacgtcgtcgagacgacgacctcgggc
atcgattctcctacgatccagcagcgcaagatttccacccgcgtcgtcgtcaacgacggc
gagagcctggcgctcggcggcctgatccaggaaaagaaatcactcggccagaagaagatg
ccggtgctcggcgatatccccctgttcggcaatgccttcaagtcgaagaccgacggcatc
aaccgcaccgagctgatcatcttcattcggccgcggatcgtgcgtgacgtgcaggaagcg
cggcaggtgaccgacgaattccgccagcaattcgatttcgaccgcaccgacacgccgggc
aggcgcatgcagcgcgacctggtccgcgtcgccaactag

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