Sinorhizobium fredii NGR234: NGR_c23320
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Entry
NGR_c23320 CDS
T00888
Name
(GenBank) polyA polymerase family protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGR_c23320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhi03019
]
NGR_c23320
Enzymes [BR:
rhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
NGR_c23320
Messenger RNA biogenesis [BR:
rhi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NGR_c23320
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
ACP26091
UniProt:
C3MFN4
LinkDB
All DBs
Position
complement(2421314..2422573)
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AA seq
419 aa
AA seq
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MTSIAAEPWFQAPSLGRVFELLNADGGEVRVVGGAVRNSLLGLPAGDVDLATTWRPEDVV
ERAKSAGIKVVPTGIDHGTVTLVIGGIPYEVTTLRRDVATDGRRAEVAFGTDWKADAGRR
DFTINALYADANGEIFDYVGGLPDIESRTLRFIGSAAERVAEDYLRILRYFRFFAHYGSG
RPDAEGLRACAQARAKLATLSAERVWGEMKKLLAAEDPGRALLWMRQAGVLGEVLPETEK
WGIDAIPGLIAAEKIFFWVPEPLLRLAAIVPPDAERLERMAARLRLSKAEAAFLVRFAEA
PAIAATLADAALDRELYRKGAEGIVARLKLSLASARRKSETDPAYLAETAAFQRLLSRAE
RWQRPVFPLSGADVLKAGVPAGPKVGELLTELENFWIDRNFSIDRATLVARLESRLRPD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgatcgccgccgaaccctggttccaggccccatcgctcggccgcgtcttcgag
ctgttgaacgccgacggcggcgaagtgcgggtcgtcggcggcgccgtccgcaacagcctc
ctcggcctgccggccggtgacgtcgatctggcgacgacctggcgcccggaggatgtggtg
gaacgggcgaagagtgccggcatcaaggtggtgccgacgggcatcgaccacggcaccgtc
acgctggtgatcggcggaattccctatgaggtgacgacgttgcgccgcgacgtggcgacc
gatggccgccgcgccgaagtggccttcggcaccgactggaaggcggatgcgggacgccgc
gatttcacgatcaatgccctctatgccgacgccaacggcgagattttcgactatgtcggc
gggctgcccgatatcgagagccggacgttgcgcttcatcggcagcgcggccgaacgggtc
gcggaggactatctgcgcatcctgcgctacttccgctttttcgcgcattacggttcgggc
cgcccggatgcggaggggctgagggcctgcgcgcaggcgcgcgcgaagctcgctacgctc
tcggccgagcgcgtctggggcgagatgaagaagctgcttgcggccgaagatccgggccgc
gccctgctttggatgcgccaggcaggcgtgctcggcgaagtgctgccggaaaccgagaaa
tgggggatcgacgccattccgggcctgatcgcggccgagaaaattttcttctgggtgccg
gagccgcttttgcggctggcggccatcgtcccgcccgatgccgagcggctcgagaggatg
gcggcgcggctgcgcctgtcgaaagcggaagcggcctttcttgttcgctttgccgaggct
ccggccattgccgccacgctcgccgacgcagcactcgatcgcgaactctaccggaagggt
gccgagggcattgttgcgcgcctcaagctttcgctcgcgtcagcgcggcgcaaatcggaa
accgatccggcgtaccttgccgaaaccgccgcctttcagcggctgttgtcgcgggcggaa
aggtggcagcgtcccgtcttccccttaagcggcgccgatgtcctgaaggcgggcgtaccc
gccggacccaaggtcggggaactgctgacggaactcgagaatttctggatcgaccgcaac
ttcagtatcgaccgggcgacgctggtcgcccggctcgaatcccggctgcgtccggactga
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