Sinorhizobium fredii NGR234: NGR_c23870
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Entry
NGR_c23870 CDS
T00888
Symbol
xdhB
Name
(GenBank) xanthine dehydrogenase
KO
K13482
xanthine dehydrogenase large subunit [EC:
1.17.1.4
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00230
Purine metabolism
rhi01100
Metabolic pathways
rhi01120
Microbial metabolism in diverse environments
rhi01232
Nucleotide metabolism
Module
rhi_M00958
Adenine ribonucleotide degradation, AMP => Urate
rhi_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
NGR_c23870 (xdhB)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
NGR_c23870 (xdhB)
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Motif
Pfam:
MoCoBD_2
MoCoBD_1
Ald_Xan_dh_C
Motif
Other DBs
NCBI-ProteinID:
ACP26146
UniProt:
C3MG74
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Position
2484488..2486824
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AA seq
778 aa
AA seq
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MDKSTFEDRQSIAGPMHSELRHDSAHKHVAGTADYIDDIPEPAGILHGALGLTDRAHAEI
MDMDLSAVAALPGVVSVLTAKDMPHSNDISPTHLHDEPVLADGRVQFHGQPAFAVIAETR
DIARRAARLAKITYRDLPHMIDVADAMAGGGELVTPPLTLQRGDAEGELERAPRRLKGRM
RIGGQEHFYLEGHIALAVPGEDDEMAVWVSTQHPSEVQHMVAQVLGVPSNAVTVNVRRMG
GGFGGKETQGNQFAALAAVAARKLRRAVKFRPDRDDDMVATGKRHDFLVDYDVGFDEDGQ
ILAVHATYAARCGFSADLSGPVTDRALFHADNAYYYPHVKLTSQPLKTNTVSNTAFRGFG
GPQGMVGGERIIEEVAFALGKDPLEIRKQNFYGDKDSDRNVTPYHQKIEDNIIRQIVEEL
ETSAEYQARRAAIIDFNRSSRVIRKGIALTPVKFGISFTLTHLNQAGALVHVYNDGSVHL
NHGGTEMGQGLYTKVAQVLADSFQIDIDRVKITATTTGKVPNTSATAASSGSDLNGMAAF
DAARQIKERLVAFAAERWQTTPDNISFVPNHVKIGEELVPFAELIGQAYVARVQLSAAGF
YKTPKIHWDRAAGRGTPFYYFAYGAAVSEVSIDTLTGEYLVDRVDVLHDVGRSLNPAIDL
GQVEGGFVQGMGWLTTEELWWDEKGRLRTHAPSTYKIPLASDRPKIFDVRLAEWSENAEK
TVGRSKAVGEPPLMLPISVLEALSMAVASVADYRECPRLDTPATPERVLMAVERLRGL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggataagtccaccttcgaagaccgccaaagcatcgccggccccatgcacagtgagctc
cgccatgacagcgcccacaagcacgtcgccgggaccgccgattatatcgacgacattccg
gagcccgccggaatcttgcacggcgcgcttggcctcacggaccgggcacacgccgaaatc
atggacatggacctctcggctgtggccgcccttcccggcgtcgtctcagtactgaccgca
aaggacatgccgcattcgaacgacatcagccccacccacctgcacgacgaaccggtgctt
gccgacggtcgcgtgcagttccacgggcagccggcctttgcggtcatcgccgagacgcgc
gacatagcccgccgtgccgcgcggcttgcgaagatcacctatcgcgacctgccccacatg
atcgatgtcgccgacgcgatggccgggggcggcgagctcgtcacgccgcccctgacgctg
cagcgcggcgacgcggaaggcgaactggagcgcgcaccacgccggctcaagggccggatg
cggatcggcggccaggagcacttctatctggaaggacacatcgcgctcgcggttcccggc
gaggacgacgagatggccgtctgggtgtcgacgcagcatccgagcgaggtccagcacatg
gtcgcgcaggtgctcggcgttccatcgaatgccgtgacggtgaatgtccgccgcatgggc
ggcggcttcggcggcaaggaaacgcagggcaaccagttcgccgcactcgccgccgtcgcc
gcgcgcaagctgcgccgcgccgtgaaattccgccccgaccgcgacgacgacatggtggcc
accggcaagcgccacgatttcctcgtcgattacgatgtcggcttcgatgaggacgggcag
atcctggcggtccacgccacctatgcggcgcgctgcggtttttccgccgatctatccgga
ccggtcaccgaccgggcgctcttccacgccgataacgcctactactatccgcatgtgaag
ctgacatcgcaaccgctgaagaccaatacggtttccaacaccgcctttcgcggcttcggc
gggccgcaaggcatggtcggcggcgagcggatcatcgaggaggtcgcctttgcgctcggc
aaggacccgctcgaaatccgcaagcaaaacttctacggcgacaaggattcggatcgcaac
gtcacgccataccaccagaagatcgaagacaacatcatccggcagatcgtcgaggaactg
gagacgagtgccgagtaccaggcgcggcgggccgcgatcatcgacttcaatagatcgagc
cgcgtgatccgcaagggcatcgcgctgacgccggtgaagttcggcatctccttcacgctc
acccatctcaatcaggcgggcgccctcgtccatgtctataatgacggttcggtccacctc
aaccatggtggcaccgagatgggccagggcctctacaccaaggtggcgcaggttctggcc
gacagcttccagatcgacatcgaccgcgtgaagatcaccgcgacgacgaccggcaaggtg
ccgaacacctcggcaactgccgcctcatcgggctccgaccttaacggcatggccgctttc
gacgcagcccgccagatcaaggaacgcctcgtcgccttcgccgccgaacgctggcagacg
acgcccgacaatatcagcttcgtgccgaaccatgtgaagatcggcgaggagctcgtgccc
ttcgcggaactcatcggccaagcctatgtcgcgcgtgtgcagctttcggccgccggcttc
tacaagacgccgaaaatccattgggaccgcgccgccgggcgcggcacgcccttctactat
ttcgcctatggcgcggcagtctccgaagtatcgatcgacacgctgaccggcgaatatctg
gtcgaccgcgtcgatgtgctgcacgacgtcggccgctcgctcaatccggcgatcgacctc
ggccaggtcgagggcggcttcgtgcaaggcatgggctggctgacgacggaggaactctgg
tgggacgagaaggggcggctgaggacgcacgctccctccacctacaagattcccctcgcc
tcggatcggccgaagatcttcgacgtgcgcctcgccgaatggtcggaaaacgccgaaaag
acggtcggccgctcgaaggcggtgggagagccgcccctgatgctgccgatctcggtgctc
gaggcgctgtcgatggcggtcgccagcgtcgccgactatcgcgaatgtccccgcctcgat
acgccggcaacgccggagcgggtgttgatggcggtggagcggctcaggggcctctaa
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