Sinorhizobium fredii NGR234: NGR_c24400
Help
Entry
NGR_c24400 CDS
T00888
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00521
Streptomycin biosynthesis
rhi00523
Polyketide sugar unit biosynthesis
rhi00541
Biosynthesis of various nucleotide sugars
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01250
Biosynthesis of nucleotide sugars
Module
rhi_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NGR_c24400 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NGR_c24400 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NGR_c24400 (rmlC)
Enzymes [BR:
rhi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NGR_c24400 (rmlC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
ACP26197
UniProt:
C3MGC5
LinkDB
All DBs
Position
2538332..2538865
Genome browser
AA seq
177 aa
AA seq
DB search
MPRFNRLPTPLAGLVVIERKRAGDERGFFSRFFCRDELRDFGGDGSIAQINHTLTRIKGA
IRGMHFQRPPHDETKFVSCLSGAVFDVAVDIRPDSPTYLQWHGEILSAENARSMMIPGGF
AHGFQTLAEECELIYLHDKPYAPGAEGGLNPLDPRLGIKWPLEVTQMSERDRAFGLL
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcttcaatcgcctccccacgcctcttgccggtctggtcgtcatcgagcgcaag
cgggcgggcgacgagcgcggcttcttctcgcgcttcttctgccgcgacgagttgcgcgat
ttcggcggcgatggctcgattgcgcagatcaaccacaccttgacccgcatcaagggcgcg
atccgcggcatgcatttccagcgaccgccgcatgatgaaacaaagttcgtctcgtgcctt
tcgggcgccgttttcgacgtagccgtggacatcaggccggactcgcccacctatctccag
tggcacggcgaaatcctcagcgccgaaaacgcccgctctatgatgatccccggcggcttc
gcgcacggcttccagacgctggcggaggaatgcgaacttatctacctacacgacaaacct
tacgcgccgggcgcggaaggcgggctcaacccgctcgatccccgcctcggcatcaaatgg
ccgctcgaggtgacccagatgtccgagcgcgaccgggcctttggcctgctctaa
DBGET
integrated database retrieval system
