Sinorhizobium fredii NGR234: NGR_c25260
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Entry
NGR_c25260 CDS
T00888
Name
(GenBank) putative RTX toxin hemolysin-type protein
Organism
rhi
Sinorhizobium fredii NGR234
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ACP26283
UniProt:
C3MGZ7
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Position
complement(2620907..2624677)
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AA seq
1256 aa
AA seq
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MATQSSGGSATSFTNTPQAQDDTYLWSEDQILNLQNYNPVSNTIILDVMANDLGGKAKSL
FALEDGDGNPITADYELLAKDVGSTGASAWETTLLGNWVRINNGKIEYRLSDGSGIPGAG
VDVNSLSAGETIKDSFVYAIRLGNGTLSEANVSLTLTGANDAAAIGIDTSATGNLAVVEA
GAGGVGDPDASGKLSISDADAGEAAFQTPASLDGAYGTFTFDPATGCWTYTLDNSRIATQ
ALKQGQPVSEMLTVTSLDGTASHAIVVNITGSNDAAAIVVDATVADDRVVSEAGAAGSGD
PHASGTLSVADVDAGEAAFQTPASLDGVYGSFSFDPTTGVWSYSLDNDRATTQALKEGQP
VSDMLNVTSVDGTASHAIVVSITGSNDAAAIVVDATVADDRSVSEAGMADSGDPDASGKL
SVADVDAGEAVFQAPGSLDGVYGSFSFDPTTGAWSYTLDNGRATTQALTAGQPVSDTLTV
SSLDGTASHAIVVNITGANDAAAIVVDATVADDRAAAEAGATGSGDPDAAGKLSVSDVDS
GEAVFAAPASLEGTYGTFSFDPATGAWTYTLDNDRATTQALKAGQPVSDTLTVTSLDGTA
SHAIVVDITGRNDAAAIVVDVADDRAAAEAGATGSGDPDAAGKLSVSDVDSGEAVFAAPA
SLEGTYGTFSFDPATGVWSYSLDNNRATTQALKAGQPVSDTLTVTSLDGTASHAIVVDIT
GSNDAAAIVVDVADDRAAAEAGAAGSGDPDASGKLSVSDADSGEAVFAAPASLEGTYGTF
SFDPATGVWSYSLDNNRATTQALKAGQPVSDTLTVTSLDGTASHAIVVDITGSNDAAAIV
VDATVADDRSVNEAGTAGSGDPHASGKLSVSDVDAGEAAFQAPASLAGIYGSFSFDAATG
EWNYILDNERAATQALSAGQAVSDTLTVTSLDGTVSHAIVVDITGADDAPPRQAPTDIKL
TPVVPTDAPNINNFEFIGSLSAADPDAGAFVFSIASQSHAGLFSISGDTLRSDDLAPNGT
FTVTVKAIQTGDPAGAAYEKTETFTIVTGSNGNTADNPSGGSGDDVLYGGSGSDMVFGLG
GDDTLFGQGGNDTLNGGAGNNVLNGDGGNDTFIFQKLSGTSNHVTDFSAGTNSTSVDKLQ
FDVGSGTFEFAVGNNNTGVDGFKSGNDGTINALGTEVAVKTDADVSNATVQSTIDGYGNI
TTGALFVFYNTDLGHAAVYYDANASAAGGAVLVAELDSIATRTALLNFNSGDFLFV
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggctacgcagagcagcggcggcagtgcgacttcatttaccaatactccacaggcacaa
gacgatacctacctctggtcagaagaccagatcctcaatctgcagaactacaatcctgtc
agcaacaccatcattctcgacgtgatggcgaatgatcttggcggaaaggccaagtcgctt
ttcgcgctagaggacggcgacggcaatccgatcaccgcggattatgagcttctcgcgaaa
gacgtcggatcgaccggcgcgtcggcctgggaaacgacgctgctcggcaactgggtcagg
atcaacaacgggaagatcgaatatcgccttagcgacggaagtggaattcccggggccggc
gtcgatgtcaattccctatcggccggtgaaaccatcaaggacagttttgtctacgccata
aggcttggcaatggtacgttgagcgaggcgaatgtgtcgctcacgctgactggtgccaac
gatgcggcggcaatcggaatcgatacgtcggcgaccggtaatctggccgtggtcgaagca
ggggcgggcggcgttggcgatccggatgcctccggcaagctcagcatttcggatgccgat
gccggcgaggcggcgttccaaacaccggcctcgctcgacggcgcctacggtaccttcacg
ttcgatccggcgaccggctgctggacttacacgctcgacaacagccgcatcgcgacgcag
gccctcaagcaaggtcagccggtcagcgagatgctgacggtgacctcgctcgacggtacg
gccagccatgcgatcgtcgtcaacatcaccggcagcaacgacgcggcagcgatcgtcgtc
gatgcgaccgtagcggacgaccgagttgtgagcgaagccggggcggccggcagtggcgat
ccgcatgcctccggcacgctcagcgtcgcggatgtcgatgccggcgaagcagcgttccag
acgccggcctcgctcgacggcgtctatggcagcttcagcttcgacccgacgaccggcgtg
tggagctacagtctcgacaacgatcgtgcgacaacgcaggccctcaaggagggtcagccg
gtcagcgacatgctgaatgtgacgtcggtggacgggaccgccagccatgcgatcgtcgtc
agcatcaccggcagcaacgacgcggcggcgatcgtcgtcgatgcgactgttgccgacgac
cggtcggtgagcgaagccgggatggccgacagcggcgacccggatgcctccggtaagctc
agcgtcgcggatgtcgatgccggcgaggcagtgttccaggcacctggatcgctcgacggc
gtctatggcagtttcagcttcgacccaacgaccggtgcctggagctacacgctcgataac
ggacgggcaacgacgcaagcgctgactgcgggccagccggtcagcgacacgctgactgtg
tcgtcgctggacggcaccgccagccatgcgatcgtcgtcaacatcaccggcgcaaacgat
gccgcggcgatcgtcgtcgatgcgaccgttgccgatgaccgggccgccgccgaagccggg
gcgacgggcagcggtgatccggatgccgccggcaagctcagcgtttccgatgtcgactcg
ggcgaagcagtctttgccgcgccggcctcgctcgagggcacctacggcaccttctcgttc
gatcccgcgaccggggcgtggacgtacacgctcgacaatgatcgggcgacgacgcaggcc
ctcaaggcgggccagccggtcagtgacacgctgaccgtgacgtcgctcgacggtaccgcc
agccatgcgatcgtcgtcgacatcaccggccgcaacgatgccgcggcgatcgtcgtcgat
gttgccgatgaccgggccgccgccgaagccggggcgacgggcagcggtgatccggatgcc
gccggcaagctcagcgtttccgatgtcgactcgggcgaagcagtctttgccgcgccggcc
tcgctcgagggcacctacggcaccttctcgttcgatccggcgaccggcgtgtggagctac
agtctcgacaacaatcgggcgacgacgcaggccctcaaggcgggccagccggtcagtgac
acgctgaccgtgacgtcgctcgacggtaccgccagccatgcgatcgtcgtcgacatcacc
ggcagcaacgatgccgcggcgatcgtcgtcgatgttgccgatgaccgggccgccgccgaa
gccggggccgccggcagcggtgatccggatgcctccggcaaactcagcgtttcggatgcc
gactcgggcgaagcagtctttgccgcgccggcctcgctcgagggcacctacggcaccttc
tcgttcgatccggcgaccggcgtgtggagctacagtctcgacaacaatcgggcgacgacg
caggccctcaaggcgggccagccggtcagtgacacgctgaccgtgacgtcgctcgacggt
accgccagccatgcgatcgtcgtcgacatcaccggcagcaacgatgccgcggcgatcgtc
gtcgatgcgaccgttgccgatgaccgttcggtcaacgaggcggggaccgcaggttccggc
gatccacatgcctccggcaagctcagcgtctcggatgtcgacgccggcgaagcggcgttc
caagccccggcgtcgctcgcgggcatctacggtagtttcagtttcgatgcagcgacgggc
gagtggaattacatactcgacaacgagcgcgcagcgacacaggcgttgagcgcaggtcag
gccgtgagcgacacgctgacggtcacgtcgctcgatggcaccgtcagccatgcgattgtc
gtcgacatcaccggcgctgatgatgcgccgcccagacaggcgccgacggacatcaaattg
acccccgtcgtcccgacggacgcccccaatatcaataatttcgagttcatcggctctctg
agcgcggctgatcccgatgcaggcgcattcgtcttcagcatcgcttcgcagtcgcatgcc
ggcttgttctcgatcagcggcgacacgctgcgttccgacgatctggcaccaaacggcaca
tttacggtgaccgtgaaggcaatacagaccggcgacccggccggggcggcatacgaaaaa
accgagactttcacgatcgtcacgggcagcaacggcaataccgcggacaacccaagcgga
ggatcgggtgacgacgtgctctatggcggaagcggcagcgacatggtgttcggccttggc
ggagacgacaccttgttcggccagggtggaaacgacacgttaaacggaggtgctggcaac
aatgtgctgaacggggatggagggaacgatactttcatcttccagaagctctccggcacc
agcaaccatgtcaccgacttcagtgccgggacgaacagcacgagcgtcgacaagctccag
ttcgacgtcggcagcgggacctttgaattcgccgtcggcaacaacaacacaggagtcgac
ggtttcaaatcggggaacgacgggacgatcaatgcactcggcacggaagtcgcggtgaag
acggatgcggacgtctccaatgcaacggtccagagtacgatcgacggctacggcaatatc
acgaccggcgcattgttcgtgttctacaacaccgacctcggccatgcagccgtctactat
gatgcgaatgcaagtgcggccggcggcgcggtgctcgtcgcggagctggacagcatcgcg
acgcgcaccgctctcctaaatttcaactccggcgacttcctgtttgtatag
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