Sinorhizobium fredii NGR234: NGR_c25330
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Entry
NGR_c25330 CDS
T00888
Name
(GenBank) putative substrate-binding component of ABC transporter
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c25330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c25330
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
NGR_c25330
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
ACP26290
UniProt:
C3MH04
LinkDB
All DBs
Position
complement(2630348..2631427)
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AA seq
359 aa
AA seq
DB search
MNINSIKRRTLLGAGLAGASMLAMPAVLRAQDKSLKVGVYGGYFKDSFDKNIFPEFTKAT
GIAVESIAEPTGEAWLVQLEQAARAGQAPADVSMMSQVAMLKGQATELWTPIDMAKIKHA
SDLLDRFVNKYPDGRVAGVGAVSWYITLVTNTNVYKEAPTSWTALWDPANADKLGLLALV
SNSFLLEVTAKTHMGGTNALDTEEGILKAFEKLAEVKPNVRLWYRDEAQFEQALKSGEIP
MGQYYHDVTGLAAADGHPVRSTFPKEGGIQDSGCWALSRASQKSEEAHIFIDYMCQPAIQ
ATLSRKVGTSPTVKRESTDLTDKEFAAVSSDIEPIVPRYDLYQTKSDWLNQKWTELIVG
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaattccatcaagcgccgcacgctgctgggagcggggcttgccggtgcatcg
atgctggcaatgcccgcggtgctgcgagcccaggacaagtcgctgaaggtcggcgtctat
ggcggctacttcaaggactccttcgacaagaacatcttcccggaattcaccaaagcgacg
gggattgcggtcgagtcgatcgccgaaccgaccggcgaggcctggctggttcagctcgag
caggcggcccgtgccggacaggcaccggctgacgtttcgatgatgtcgcaggttgcgatg
ctcaagggtcaggcgaccgagctctggacgccgatcgacatggcgaagatcaagcatgcg
tcggatcttctcgaccgcttcgtcaacaaatatccggacggccgcgtcgccggtgtcggt
gccgtatcctggtacatcacgctcgtcaccaacaccaatgtctacaaggaagccccgacc
tcctggacggccctctgggatccggcgaacgccgacaagctcggtctgctggcgctggtc
tccaactccttcctgctcgaagtgaccgccaagacccacatgggcggcaccaatgcgctc
gacacggaggagggcatcctgaaggccttcgagaagctcgccgaagtgaaaccgaatgtt
cgcctctggtaccgcgacgaggcgcagttcgagcaggcgctgaagtcgggcgaaattccg
atgggccagtactaccacgacgtcaccgggcttgccgccgccgacggtcatccggttcgc
tcgaccttcccgaaggagggcggcatccaggattccggttgctgggcgctgtcgcgcgcc
tcgcagaagtccgaggaggcgcatatcttcatcgactacatgtgccagccggcgatccag
gcgacgctgtcgcgcaaggtcggcacctcgccgacggtcaagcgcgagtcgaccgatctg
acggacaaggagtttgccgcggtatcgtccgatatcgagccgatcgtcccgcgctacgac
ctctaccagacgaagtcggactggttgaaccagaagtggacggagcttatcgtcggttga
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