KEGG   Sinorhizobium fredii NGR234: NGR_c26960
Entry
NGR_c26960        CDS       T00888                                 
Name
(GenBank) diaminopimelate decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
rhi  Sinorhizobium fredii NGR234
Pathway
rhi00300  Lysine biosynthesis
rhi00470  D-Amino acid metabolism
rhi01100  Metabolic pathways
rhi01110  Biosynthesis of secondary metabolites
rhi01120  Microbial metabolism in diverse environments
rhi01230  Biosynthesis of amino acids
Module
rhi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:rhi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    NGR_c26960
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    NGR_c26960
Enzymes [BR:rhi01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     NGR_c26960
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N DUF6003
Other DBs
NCBI-ProteinID: ACP26445
UniProt: C3MHU3
LinkDB
Position
2808642..2809910
AA seq 422 aa
MNHFDYRDGILYAEDVPVTDIARAVGTPFYCYSTATLERHYRVFAQAFADVDAMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPAERIMFSGVGKTPREMDLGLEAGIY
CFNVESEPELEILNQRAVRAGKQAHVSFRINPDVDARTHAKISTGKKENKFGISWERARA
VYAHAATLPGIKVTGIDMHIGSQITELQPFDDAFKLLRELVDTLRSDGHAIDHVDIGGGL
GIPYREDNNPPPLPDAYADIVKNQLKGLDCKIVTEPGRLIVGNAGILVTEVIYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVKISAANAPRIKADVVGPVCETGDYLALDREMAM
PKPGDLFAIGSAGAYGAVQAGTYNSRLLVPEVLVKGDRFHVIRPRKDYDALIDLDSVPDW
LD
NT seq 1269 nt   +upstreamnt  +downstreamnt
gtgaaccatttcgactatcgcgacggaatcctctacgccgaagacgtgcccgttacggat
atcgcccgcgccgtcggcacgccgttctactgctattccactgccacgctcgagcgccac
tatcgggtcttcgcgcaagccttcgccgatgtcgatgcgatggtctgttacgcgatgaag
gccaattccaatcaggccgtcctgaagaccctcggccggctcggcgccggcatcgacgtg
gtctccgaaggtgagttgcgtcgcgctcttgccgccggcattcctgccgagcggatcatg
ttttccggcgtcggcaagaccccgcgtgaaatggatctggggctggaagccggcatctat
tgcttcaacgtcgagtccgagccggagctggaaatcctcaaccagcgggccgtgcgcgcc
ggcaagcaggcgcatgtttccttccgcatcaatccggacgtcgacgcccgcacccatgcg
aagatctcgaccggcaagaaggaaaacaagtttggtatttcctgggagcgggcgcgggcc
gtctatgcccatgcggcgacgctcccgggtatcaaggtgaccggcatcgacatgcatatc
ggcagccagatcaccgagctgcagcccttcgatgacgccttcaagctgttgcgcgaactg
gtcgatacgctgcgctccgatggccacgccatcgaccatgtcgatatcggcggcggcctc
ggcattccctatcgggaagacaacaatccgccgccgctccccgatgcctatgccgatatc
gtcaagaaccagctcaagggcctcgactgcaagatcgtcaccgaaccggggcgtctgatc
gtcggcaacgccggcattctcgtcaccgaagtgatctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggggcgatgaacgacctgatccggccgaccctctacgaggcc
tatcacgagatcaggccggtgaagatttccgccgccaacgcgccgcgcatcaaggccgac
gtggtgggtcctgtctgcgagacgggcgactatctggcgctcgaccgggaaatggcaatg
cccaagccgggcgaccttttcgcgatcggctcggcaggcgcttacggcgcggtccaagcc
ggcacctataacagccgacttttggtgcccgaggttcttgtcaagggcgatcgtttccac
gtgatccgcccgcgcaaggactacgatgccctgatcgacctcgactcggtgccggactgg
cttgactga

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