Sinorhizobium fredii NGR234: NGR_c27540
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Entry
NGR_c27540 CDS
T00888
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
NGR_c27540 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhi03016
]
NGR_c27540 (trmU)
Enzymes [BR:
rhi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
NGR_c27540 (trmU)
Transfer RNA biogenesis [BR:
rhi03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
NGR_c27540 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
QueC
NAD_synthase
Arginosuc_synth
ATP_bind_3
DUF7411
ThiI
Motif
Other DBs
NCBI-ProteinID:
ACP26502
UniProt:
C3MI00
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All DBs
Position
complement(2867708..2868904)
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AA seq
398 aa
AA seq
DB search
MNSLDFDRKPEDTRVVVAMSGGVDSSVVAGLLKREGYDVLGITLQLYDHGAAVHRAGSCC
AGQDIDDARRVCETLGIPHYVLDYEARFRETVINPFAESYIAGETPIPCVACNQTVKFAD
LLATAKELGADALATGHYIRSRPSPKPRYQGQRALYRPTDAERDQSYFLFATTQEQIDYL
RFPLGNLSKPETRALAEEMGLVVAKKADSQDICFVPQGKYSDIVSKLKPNAALGGEIVHL
DGRVLGTHEGILHYTIGQRRGIGVATGEPLYVVYLDARSRRVIVGPKEALETRRVYLRDV
NWLGDEEIDAAASRGFACFAKVRSTRQPAPAEMKCDADGIYVELVDGEAGVAPGQACALY
SGTGEDARVYGGGFIRKSEREPAAEAALQALLQAPAAA
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtgaacagtctcgattttgaccgcaagcccgaagatacgcgtgtcgtcgtcgccatgtcc
ggcggcgtcgattcctccgtggtggccgggctgctcaaacgcgagggctacgacgttctc
ggcatcaccctgcagctttacgaccatggcgcggcggttcaccgggccggctcctgctgc
gccggccaggatatcgacgatgcgcggcgtgtctgcgagacgctgggcattccgcattac
gtgctcgactacgaggcgcggttccgcgagacggtgatcaacccctttgccgaaagctac
attgccggcgaaacgccgatcccctgcgttgcctgcaaccagaccgtcaagttcgccgac
ctcctggcgaccgccaaggaactcggcgccgacgcgctggcgaccggccactacatccgc
tcgcggccgagcccgaagccgcgctaccagggccagcgtgccctctaccggccgaccgac
gcggagcgcgaccagagctattttctcttcgcgacgacgcaggagcagatcgactatctg
cgctttccgctcggcaacctctccaagcccgagacgagggcgctggccgaggaaatgggc
ctcgtcgtcgccaagaaggccgacagccaggacatctgtttcgtgccgcagggcaagtac
agcgacatcgtctcgaagctgaagccgaatgcggcgcttggcggcgagatcgtgcatctc
gacgggcgggtgctcggcacccatgagggtatcctgcactacacgatcggccagcgccgc
ggcattggcgtggcgaccggcgagccgctctatgtcgtctatctcgacgcccgctcgcgc
cgcgtcatcgtcggcccgaaggaggcgctggagacccgccgcgtctatctgcgcgacgtc
aactggctgggcgacgaggaaatcgacgcggcggcaagccgcggcttcgcatgcttcgcc
aaggttcgctccacccgccagccggcgccggccgagatgaaatgcgatgcggacggcatc
tatgtcgaactcgtcgacggcgaggcgggcgtggcgcccggccaggcctgcgcactctat
tccggcaccggcgaggacgcccgcgtctatggcggcggcttcatccgcaaatcggaacgc
gaaccggcggccgaggcggcccttcaggcgcttctgcaggcgcccgcggccgcctga
DBGET
integrated database retrieval system
