Sinorhizobium fredii NGR234: NGR_c28590
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Entry
NGR_c28590 CDS
T00888
Name
(GenBank) putative response regulator/GGDEF domain transcriptional regulator
Organism
rhi
Sinorhizobium fredii NGR234
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
PAS_4
PAS_7
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
GGDEF_2
GGDEF_GdpP
ECF_trnsprt
Motif
Other DBs
NCBI-ProteinID:
ACP26605
UniProt:
C3MIP2
LinkDB
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Position
complement(2983357..2985243)
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AA seq
628 aa
AA seq
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MNGIWGQFVGNLAFVSLAISIWAHLSIWLRRRFAGHDKILFGLMAGVASIGSILLAVDFG
PGIHMDLRFAPLALAGMFGGPLAAALSAFLAAAFRAALGGVSAIDGVIAILAVTGMGLSV
NLVMKKRSPTLLSVVVFGVAVGGLLTVLMAVLPTLSKAHALAAMGLPMAAMNCAATIVCG
FIVLTTQHLELERRMLETAFSQSPDYLYVKDRDSRFITVNENMIRLYRFKTTVEMVGLSD
FDLHPQKLAEELYHREQEVMRTGVPLLDSLEHIEGRDLLASKVPLRDKEGRVIGLAGVTR
DITDRTALERELRESKNLLSHAMAGMSDGFAMFDRQGYLIFCNEQYRNAFPLSGSARVVG
AHISDIVRQTAETRERLNVPYDSVDEWITVATSTLHRNKDEEVQLHNGDWRSIKTRLATD
GTAMVVVSDITVMKQAEIALRLSAEQLKNLAETDGLTGIVNRRAFDEAFMREAARCARGN
APLSLLMIDLDRFKAYNDTYGHPAGDQCLRLVSKCLLNSAKRPGDIVARYGGEEFVVLLP
EADEKAAAVVAEKFARLLGEENIVHAQSEFGHVTASIGIASAMGHLLQAEPGRLLSEADA
ALYEAKMRGRNRILVRVLADAADVKLAG
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcatctgggggcagtttgttggcaacctcgcatttgtaagcctggcgatctcg
atctgggcgcatttgtcgatctggctccgccggcggtttgccggacatgacaagatcctc
ttcggactgatggccggcgttgcatcgatcggctcgatcctgctcgccgtcgacttcggc
cccggcatccatatggacctgcgcttcgcgccgctcgctctcgccggcatgttcggcggg
ccgttggcggcggcactgagtgcattcctcgccgctgctttccgggcggcgctcggcggt
gtttcggccattgatggcgtcatcgcgatccttgctgtcacaggcatgggcctgagcgtc
aacctcgtcatgaagaagaggtctccgacgcttctctccgtcgtcgtgttcggcgtggcg
gtgggggggctgctgaccgtgctgatggcggtgctgcctaccctgtcgaaagctcacgcc
ctggcggcaatgggcctgcccatggcggcgatgaattgcgcggccaccatcgtctgcggt
ttcatcgtgctgacgacgcagcatctggaacttgagcgcaggatgctggagaccgcgttc
tcccaatcgcccgactatctctacgtgaaggacagagacagccgcttcattaccgtcaac
gaaaacatgatccgcctctaccgcttcaagacgacggtcgagatggtgggtctttcggat
ttcgatctccatccgcaaaagcttgccgaggaactgtatcatcgagagcaggaggtgatg
cggacgggcgtgccccttctcgattccctcgagcatatcgaaggccgcgacctgctcgcc
tccaaggtgccgctgcgcgacaaggagggacgcgtcatcggtctggcgggcgtcacgcgc
gacatcacggaccgcaccgcgctcgagcgggagctgcgcgaaagcaagaacctgctctcc
cacgcgatggcgggaatgtccgacggcttcgccatgttcgaccggcagggctatctgatc
ttctgcaacgagcaataccgcaatgcctttccgctgtcgggaagcgcccgggtggtcggc
gcgcatatcagcgatatcgttcgccaaaccgccgaaacacgcgagcggctcaacgtccct
tacgattcggtggacgagtggatcactgtggcgacgtccacattgcaccgcaacaaggac
gaggaggttcagcttcacaacggcgattggcgcagcatcaagacaaggctcgcgacggac
ggtacggcgatggtggtcgtctcggacatcacggtgatgaagcaggccgaaatcgctctc
aggctttcggccgagcagttgaagaacctggcggagacggacggattgaccggcatcgtc
aaccgtcgcgccttcgatgaggccttcatgcgcgaggcggccagatgcgcaaggggcaac
gcgccgctcagcctgctgatgatcgatctcgatcggttcaaggcgtacaacgacacctac
ggccatccggccggcgatcagtgcctgcggctcgtcagcaagtgtcttctcaattcggcg
aaacgcccgggcgatatcgtcgcccgctacggtggcgaggaatttgtcgtcctgttgccg
gaggccgacgagaaggccgcggccgtcgttgccgagaaattcgcccgtctgctcggcgag
gaaaacatcgtccatgcgcaaagcgaattcggacatgtcacggcaagcatcggcatagcc
tcggcgatggggcatctcctgcaggcagagccgggccgcctcctgtcggaagcggacgcc
gctctctacgaagcgaagatgcgcggccgcaatcgcattctcgtgcgcgtgctcgccgat
gccgcggacgtcaagttggctggttag
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