Sinorhizobium fredii NGR234: NGR_c29920
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Entry
NGR_c29920 CDS
T00888
Symbol
lpdA2
Name
(GenBank) dihydrolipoamide dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00010
Glycolysis / Gluconeogenesis
rhi00020
Citrate cycle (TCA cycle)
rhi00260
Glycine, serine and threonine metabolism
rhi00280
Valine, leucine and isoleucine degradation
rhi00310
Lysine degradation
rhi00380
Tryptophan metabolism
rhi00620
Pyruvate metabolism
rhi00630
Glyoxylate and dicarboxylate metabolism
rhi00640
Propanoate metabolism
rhi00670
One carbon pool by folate
rhi00785
Lipoic acid metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
rhi01120
Microbial metabolism in diverse environments
rhi01200
Carbon metabolism
rhi01210
2-Oxocarboxylic acid metabolism
rhi01240
Biosynthesis of cofactors
Module
rhi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rhi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
rhi_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
rhi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NGR_c29920 (lpdA2)
00020 Citrate cycle (TCA cycle)
NGR_c29920 (lpdA2)
00620 Pyruvate metabolism
NGR_c29920 (lpdA2)
00630 Glyoxylate and dicarboxylate metabolism
NGR_c29920 (lpdA2)
00640 Propanoate metabolism
NGR_c29920 (lpdA2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NGR_c29920 (lpdA2)
00280 Valine, leucine and isoleucine degradation
NGR_c29920 (lpdA2)
00310 Lysine degradation
NGR_c29920 (lpdA2)
00380 Tryptophan metabolism
NGR_c29920 (lpdA2)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NGR_c29920 (lpdA2)
00670 One carbon pool by folate
NGR_c29920 (lpdA2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rhi04147
]
NGR_c29920 (lpdA2)
Enzymes [BR:
rhi01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
NGR_c29920 (lpdA2)
Exosome [BR:
rhi04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
NGR_c29920 (lpdA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
HI0933_like
GIDA
NAD_binding_8
FAD_binding_3
UDPG_MGDP_dh_N
FAD_oxidored
AlaDh_PNT_C
3HCDH_N
DAO
Lys_Orn_oxgnase
Motif
Other DBs
NCBI-ProteinID:
ACP26735
UniProt:
C3M924
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All DBs
Position
3138508..3139902
Genome browser
AA seq
464 aa
AA seq
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MKEISCKLLVLGAGPGGYVCAIRAGQLGVNTVIVEKAKAGGTCLNVGCIPSKALIHAAEE
FHKLRAVASGKSPLGLSLEAPAIDLERTVAWKDGIVGRLNSGVTGLLKKAGVKAVIGQAR
FVDGKTVDVETEIGVQRIRAEAIVIATGSAPVELPDLPFGDNVISSTEALALKEVPQTLA
VIGGGYIGLELGTAFAKLGSKVTVLEAMDRILPQYDADLSKPVMKRLGELGIDVFTRTAA
KRLSADRRGLLAEENGRAFEVAAEKVLVTVGRRPVVEGWGLEEIDLDRSGKFIRIDDQCR
TSMRGIYAIGDVTGEPMLAHRAMAQGEMVAEIVAGQKRSWDKRCIPAVCFTDPEIVSAGL
SPEEARAAGIEIKIGQFPFQANGRAMTTLAEDGFVRIVARADNHLVLGIHAVGHAVSELS
SAFALAIEMGARLEDIAGTIHAHPTQSEAFQEAALKGLGHALHI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggaaatttcctgcaagctcctggtgctcggcgccggccccggcggctatgtctgc
gccatccgggccggacaactcggcgtcaacaccgtgatcgtcgagaaggcgaaggcgggc
ggcacctgcctcaatgtcggctgcatcccctcgaaggcgctgatccatgcggccgaggaa
tttcacaagctgcgcgccgtcgcctccggaaaaagcccgctcggcctctcgcttgaggcc
ccggcgatcgacctcgagcgaacggtcgcctggaaggacggcattgtcggccgcctgaac
agcggcgtgacagggcttctgaagaaggccggcgtcaaggccgttatcggtcaagcgcgc
ttcgtcgacggaaagacggtggatgtggaaaccgaaatcggcgtccagcgcattcgcgcc
gaagcgatcgtcatcgccaccggttcggctccggtcgagcttcccgacctgcctttcggc
gacaatgtcatctcctcgaccgaggcgctggctttgaaggaagtgccgcagacgctcgcc
gtcatcggcggcggctatatcggcctcgaactcggcaccgccttcgccaagctcggctcg
aaggtcaccgtgctcgaagcgatggaccgcatcctgccgcaatatgacgccgacctgtcg
aagccggtgatgaagcggctcggcgaactcggcatcgacgtcttcacccgcaccgcagcc
aagcgcctgtcggcggatcggcgcggcttgcttgccgaggaaaacggccgcgccttcgag
gtggcggcggagaaggttctggtcaccgtcggtcgtcggcccgtggtcgagggctggggg
ctggaggagatcgatctcgaccgttcgggcaagttcatccgcatcgacgaccaatgccgc
acctcgatgcgcggcatctatgcgatcggcgatgtcaccggcgaaccgatgctcgcccat
cgcgccatggcgcagggcgagatggtcgcggagatcgtcgccggccagaagcgcagctgg
gacaagcgctgcatcccggccgtctgcttcactgacccggagattgtcagcgccggtctc
tcgccggaggaggcgcgcgcggccggcatcgagatcaagatcggccagttccccttccag
gcgaacggccgtgccatgacgacgcttgccgaggatggcttcgtccgcatcgtcgcccgc
gccgacaaccacctcgtcctcggcatccacgccgtcgggcatgcggtctccgagctttcc
tccgcctttgcgctcgccatcgaaatgggtgcgcgtctcgaggatatcgccggcacgatc
cacgcccatccgacgcagtcggaggccttccaggaagcggccttgaaggggctggggcac
gcgctgcatatctga
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