Sinorhizobium fredii NGR234: NGR_c30790
Help
Entry
NGR_c30790 CDS
T00888
Name
(GenBank) conserved hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c30790
Transporters [BR:
rhi02000
]
Other transporters
Pores ion channels [TC:
1
]
NGR_c30790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ACP26814
UniProt:
C3M9N9
LinkDB
All DBs
Position
3229197..3234755
Genome browser
AA seq
1852 aa
AA seq
DB search
MLVVALLLLVAFLGFTVPGARVVAWAIEKYAATPDQIVRISDPGALLTGDFTAGTVTLFD
GEGIYAEVRDLSVNWSPAELLSMRFDASHISAASVRLERLPIPSTETKEVRSTLALPVDV
KIDALDLQEIVIGKAIAGKDQFLTAKGKVDATNSSIALAFDAAERDRPEARAVADLVFNP
AGNELKLEAEIAEPKGGLLAKLLRLPGEPSVDIRLTGQGPLSDWTGSGTASLDGSELLRL
EGRHVLAADGMHNLNLSGGGAFATLMPTAFRPLFEGTTSIDLTAAFDGKRKVRIDAGKLA
TGALTLNASGTVDSRGENNLQASVAGTSGPFDFRWPLKDGELQARINTANLTLIGEGQSA
ILDIAADIASLGLPQGNLGAIRLSAQSDAFNLETQSGSLKTAVEIGETRFASADLDRAIK
APMKLAGTVAIAPEDIRFDPLTIESPGIGGSLTGSLDRTDTTLGAAFKLFAVPGVLPPAL
AEKFEKTIAVSGNLLTEEDGSLQVSGLEINSEAVEASGSLTLSGETLTADLKGAVPDLGR
FLPDAKGSAAFQAAASGPLAKLGVKAEITSSGATLAGRTLSDLTINADATATPGSPEAKL
TATGTLDGQAIDIRADVVSKDGRTSVPVLEAKIGGNSLTGTIDLTADFKPNGRFDFNLPD
LGLLAAMAGQQASGDLAGSATLETVNGVTSVAIKANGNTIARDALTIAKPAVDLGIADIA
RLAIKGSVRAESIAQGDNRVSDLTLAFEQQGSRTGFSAEGLYDGAPLKAAGELTSDAGRT
EIRLTSAAAAPRRLPLSLAGPTVIAIENGVAHLDGLTIQASTGTVAVSGTAGDNLDLRAS
LNDLPAVLINIFAPTLGAEGTIAGTVDIDGEAQAPVVAYDLAWSGASMSSLRSGGLAPQD
LTARGAVTITDATISFDPTTIESPGFRGNLVGSLARAEKTATASFDVRAEPGFLPPGLQA
RFDAPVAVSGKVETGGDGSVKLRALEIQSGTVNASGSATIAEGQLTADMEGTLPDLGKLL
ADADGKAGFNADVSGPLDSLAIKGELTSSGARLAGRSLSDLIVTADATVKPGSPQAKLSA
TGALDGQPIDVRAEVVSAEGRTSIPTLEAKIGDNRITGAIDLTADFKPNGTIDFNLPDLG
LVAAMAGQKASGDLAGSAKVATANGVTSVSIKASGSSIKRDALAVTKPVADIRIADIAAL
AIRGTVRADSVAQGQNRVSALNLTFDQQGGRTGFDVAGQYDGAPLVAKGDLSSAGGRTEV
RLASLSAAPRKLPLKLARPTVVAIENGVVRLGDLTIQASNGTIAVAGTAGERLDISARLN
ALPAALINTFAATLGAEGTIDGTVNLSGTAAAPVVNYDLRWSGASVAAARGAGVTGLQIA
AKGRFANNRVTLDATVSGPGGLTFRGGGQVDVAGNMPMSMKFAGDVPFALLAGIMAEQGF
TLTGSARVDLSLSGSARAPQIAGTVSTTGGRLVDVRRNLALNDLAANVTLDGRQATITRL
SGNLASGGSIEASGTVGIVAGSNFPADLRIRLNNATYVDGTLFTANLAGDLTLKGPLVAT
PVLGGELTIRRAAITVPERLPTSLAAIDIKHRNAPAGVRQMTRDVRRETSGGANGVNASG
VIAFDLAVRSPGQFFVRGRGIDAELGGDLTIRGTAVRPIVSGDFDMRRGRLEILGKRLTF
TDGHIGFGGDLVPTLDLDASSSAGSTTITVNIAGPANNPTVTFSSSPALPQDEILAQLIF
NRSLNNLSAFQIAQLASAVSQLAGGSSTSLLDGLRNKLGVDDLDVTTDESGAAQVRAGKY
LNDRTYLELQQGSDSASSKAIINLDIGRGVKLKGEAAGDGAAAGGIFFEREY
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgtcgttgcgctgcttctcctcgtcgccttcctcggcttcaccgtgcccggcgcg
cgcgtcgtcgcctgggcgatcgaaaaatatgcggccacacccgaccagatcgtccgcatc
tccgatccgggcgcgctgctcaccggcgatttcaccgccggaacggtgacgcttttcgac
ggcgagggaatctatgcggaggttcgcgacctgtcggtgaactggtcgccggccgaactt
ctgtcgatgcgcttcgacgcgagccacatatctgccgcctccgtccgcctcgaacggctg
ccgatcccctccaccgagacgaaggaagttcgaagcacgctcgccctgcccgtggatgtg
aaaatcgatgccctcgatctccaggagatcgtcatcggcaaggcgatcgccggcaaggac
cagttcctgaccgccaagggcaaggtcgacgcgaccaactcgagcatcgcgctcgccttc
gatgcggccgaacgcgaccggccggaagcgcgcgccgtcgccgacctcgtcttcaatccg
gccggcaacgagctgaagctcgaggccgagatcgccgaaccgaagggcgggctgctcgcc
aagctgttgcggctgccgggcgaaccatcggtcgatatccggctcaccggacaggggccg
ctttccgactggaccggctcaggcaccgcgtcgctcgacggcagcgagcttctgcggctg
gagggccgccacgtgttggcggccgatggcatgcacaacctcaatctctccggcggcggt
gctttcgccaccctgatgccgaccgccttcaggccgcttttcgagggaacgaccagcatc
gacctgacggccgccttcgacgggaagcgcaaggtccggatcgacgcgggcaagcttgcg
accggcgccttgacgctgaacgcctcgggaacagtcgacagccgcggcgaaaacaatctt
caggcaagcgtcgccggcacgagcggcccgttcgatttccgctggccgctgaaggacggc
gagctgcaggcccgcatcaacacggccaacctgacgctgatcggcgaagggcaatcggcg
atcctcgacattgccgccgatatcgcctcgctcggcctgccgcagggaaatctcggcgct
atccggctctcggcgcaaagtgacgccttcaacctcgaaacgcagtccgggtcgctgaag
acggcggtggaaatcggcgagacgcgcttcgcaagcgccgatctcgaccgggcgattaag
gcccccatgaagctcgccggcaccgtcgcgatcgcgccggaggatatccgcttcgacccg
ttgacgatcgaaagccccggcatcggcggctccctcaccggcagcctcgatcgcaccgac
acgacactcggggctgcgttcaagctcttcgccgttccgggcgtgctgccgccggcgctc
gccgaaaagttcgagaagacgatcgccgtctccggcaatctgctgaccgaagaagacggc
agccttcaggtgagcggcctcgagatcaactccgaagccgtcgaagcctccggctcgctt
acgctttcgggcgagacgctgacggccgatctgaagggcgcggttccggatctcggccga
tttttgcccgacgcaaagggcagcgcggccttccaggcggccgcctccggccccttggcc
aagctcggcgtcaaggcggagatcacctcgagcggcgcgacgctcgccggacgcacgctg
agcgatctaaccatcaatgccgatgcgacggcgacgcccggcagccccgaagcgaagctc
accgccacgggcacgctcgacggccaggcgatcgacattcgcgccgacgtcgtttcgaag
gacggccgcacctccgttccggtgctggaagcgaaaatcggcggcaacagcctcaccggc
acgatcgacctgacggccgatttcaagccgaacggcaggttcgacttcaacctccccgat
ctcgggctccttgccgccatggccggccagcaggcctccggcgaccttgccggttcggcg
acgctcgagaccgtcaacggcgtcacgtcggtcgcaatcaaggccaatggcaacaccatc
gcgcgggacgcgctgacgatcgccaaaccagccgtcgatctcggcatcgccgacattgcc
agactggcaatcaagggcagcgtcagggcggaaagcattgcgcagggcgacaaccgggtt
tccgacctcaccctcgctttcgaacagcagggaagccggaccggcttttcggccgaaggc
ctctatgacggcgcgccgctcaaggcagccggcgagctgacgagcgacgccggccgcacc
gagatccgccttacctccgccgcggcggcaccgagacgcctgccgctgagcctcgccggg
ccgaccgtgatcgccatcgaaaacggcgtggctcatctcgacgggctgacaatccaggct
tcgaccggcaccgtcgccgtttccggcacggccggcgataacctcgacctccgggcgagc
ctgaacgacctccccgccgtactcataaacatcttcgcgccgacgctcggcgccgaaggc
accattgccggcacggtcgatatcgatggcgaagcgcaggccccggtggtcgcctacgac
ctcgcctggagcggcgcctccatgtcctcgctgcgatcgggagggcttgccccgcaggat
ctgaccgccaggggcgcggtcaccatcaccgacgcgacgatcagcttcgacccgacgacg
atcgagagccccgggttccgcggtaatctcgtcggcagcctcgcccgtgccgagaaaacg
gcgacggcgagcttcgacgtccgggctgagccgggcttcctgccgcctggccttcaagcg
agattcgacgcgccggtggccgtgtcgggcaaggtcgagaccggcggcgacggcagcgtc
aagctgcgcgccctcgagatccagtccggcaccgtcaacgccagcggttcggcaaccatc
gccgaaggtcaactcaccgccgacatggagggtacgctgcccgatctcggcaagctgctt
gccgatgcggacggaaaggccggcttcaacgccgatgtttccggcccgctcgattcgctg
gccatcaagggcgagctgacctcgagcggcgcaaggctggccggccgctcgctgtcggac
ctgatagttaccgcggacgcaacggtcaagccggggagcccgcaggcaaaactcagcgcg
accggcgcgctcgacggccagccgatcgatgtccgggccgaagtggtttcggcggagggc
cggacatccatccccaccctcgaggcgaagatcggcgacaaccgcatcaccggcgcgatc
gacctgacggcggatttcaagccgaacggcaccatcgacttcaaccttcccgatctcggc
ctggtcgccgccatggccggccagaaggcgtccggcgaccttgcgggctcggcgaaggtt
gcgacggcaaacggcgtcacatccgtgtcgatcaaggcaagcggcagcagcatcaagcgt
gatgcgctggcggtcaccaagccggtggccgatatccgcatcgccgacatcgccgctctg
gcgatccgtggcaccgtcagggccgacagcgtcgcgcaggggcagaaccgcgtctccgcc
ctcaacctgaccttcgaccagcagggcggccggacgggcttcgacgtcgccggccagtat
gacggcgctccgcttgtcgccaagggcgatctgtcgagtgccggcggccgcaccgaagtt
cgtctcgcctcgctttcggccgcgccgcggaagctgccgctgaagctcgccaggccgacg
gtcgtcgccatcgagaatggcgtcgtgcgccttggcgacctgaccatccaggcatcgaac
ggcacgattgccgtcgctggaaccgctggtgagaggctcgacatttcggcgagactcaat
gccttgcccgccgccctgatcaacaccttcgcggcaacgctcggcgccgaaggaacgatc
gacggaaccgtcaatctcagcggcaccgccgccgcgccggtcgtcaactacgatctgaga
tggagcggtgcttcggtcgccgccgcgcgcggcgccggcgtgacgggcctgcaaatcgcg
gcgaagggtcgatttgccaacaaccgcgtcacgctcgacgcgaccgtctcggggccgggt
ggcctcaccttccggggcggcggccaggtcgacgttgccggcaacatgccgatgtcgatg
aaattcgccggcgatgtgcccttcgcgctgcttgccggcatcatggcggagcagggtttc
acccttaccggttcggcgagggtcgatctgtccctctccggttcggccagggcgccgcaa
atcgccggcaccgtttccaccaccggcggccggcttgtcgacgttcggcgcaatctggcg
cttaacgaccttgcggccaatgtcacgctcgacggccggcaggcgacgatcaccaggctc
tccggcaatctcgccagcggcggatcgatcgaggcaagcggcacggtgggcattgtcgcc
ggttccaacttcccggccgacctccgcattcgcctcaacaacgccacctatgtggacggc
accctgttcaccgcaaatcttgccggtgacctgacgctcaaaggcccgctcgtcgcgacg
ccggtgctcggcggcgaactgacgatccgcagggcggcgattaccgtgccggaaagactg
ccgacctcgctcgcggcgatcgacatcaagcaccggaacgcgccggccggggtcaggcag
atgacgcgggacgtgcgcagggagacgtccggtggtgcgaacggcgtcaacgccagcggt
gtcatcgcctttgatctcgccgtccgctcacccggccagttcttcgtgcgcggccgcggc
atcgatgccgaactcggcggcgacctgacgatccgcggcaccgccgtccggccgatcgtc
tccggcgatttcgacatgcggcgcggccggctggaaatcctcggcaaacggctgaccttc
accgacggccatatcggcttcggcggcgatctcgtgccgaccctcgacctcgacgccagc
tcgagcgccggttcgaccaccatcaccgtcaacatcgccggaccggccaataacccgacg
gtgaccttctcctcctcgccggcgctgccgcaggacgagatcctggcgcagctgattttc
aaccggtcgctcaacaacctgtcggccttccagatcgcccagctcgcctcggcggtcagc
cagcttgccggcggcagctcgacgtcgctgctcgacggcctgcgcaacaagctcggcgtc
gacgacctcgacgtcaccaccgacgagagcggcgccgcccaggtgcgggccggcaaatat
ctcaacgaccggacctatctcgagctgcagcaaggctcggactccgcctccagcaaggcg
atcatcaatctcgacatcggccgcggcgtgaagctgaaaggcgaggccgccggcgacggc
gcggccgccggcggcatcttcttcgagcgggagtattag
DBGET
integrated database retrieval system