Sinorhizobium fredii NGR234: NGR_c30830
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Entry
NGR_c30830 CDS
T00888
Symbol
rocD
Name
(GenBank) ornithine aminotransferase
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00330
Arginine and proline metabolism
rhi01100
Metabolic pathways
rhi01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
NGR_c30830 (rocD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rhi01007
]
NGR_c30830 (rocD)
Enzymes [BR:
rhi01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
NGR_c30830 (rocD)
Amino acid related enzymes [BR:
rhi01007
]
Aminotransferase (transaminase)
Class III
NGR_c30830 (rocD)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
DegT_DnrJ_EryC1
KYNU_C
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
ACP26818
UniProt:
C3M9P3
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All DBs
Position
3237081..3238286
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AA seq
401 aa
AA seq
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MKTTAALIETEHLLGAHNYKPLDVVLTRGEGVFVWDIEGNRYLDCLSAYSAVNQGHCHPK
IFKAMVEQAQKLTLTSRAFRNDQLALFYEEIAALTGSHKVLPMNSGAEAVETAIKAVRKW
GYEVKGVAADQAEIIVCANNFHGRTIGIVGFSTDPDSHDGFGPFAPGFRIVPFGDIDAFR
AAISENTVAFLVEPIQGEAGVIVPPAGYFAEVRELCTKHAITLVLDEIQTGLGRTGKLLA
EEHEAIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAIARAAL
KVLTEEGMIENSARMGERFMTGLTDIRSNIIREVRGRGLMLAVELVPEAGGARKYCEALK
ARGILAKDTHGDTIRIAPPLVITAGEVDWALEQFAAVLAST
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgaagaccacggccgccctgatcgagaccgaacatctgctcggcgcacacaattacaag
ccgctcgacgtcgtgctgacgcgcggcgaaggcgtgttcgtctgggacatcgagggcaac
cgttatctcgactgcctgtcggcctattcggccgtcaaccagggccattgccacccgaag
atcttcaaggcgatggtggagcaggcgcagaagctgacgctcacctcgcgtgccttccgc
aacgaccagctcgcgctcttctacgaggagatcgctgcgctgaccggctcgcacaaggtg
ctgccgatgaattccggcgccgaggcggtcgagacggcgatcaaggccgtccgtaaatgg
ggatacgaggtcaagggcgtcgccgccgaccaggcggagatcatcgtctgcgccaacaat
ttccacggccgcaccatcggcattgtcggcttttcgaccgatcccgactcgcatgacgga
ttcggtcccttcgcgcccggcttcaggatcgttcccttcggcgacatcgatgccttccgg
gcggcgatcagcgagaacaccgtcgccttcctggtcgagccgatccagggcgaggccggc
gtcatcgtaccgcctgccggctatttcgcggaagtgcgcgagctctgcacgaagcacgcc
atcacgcttgtcctcgacgagatccagaccggtctcggccgcaccggcaagctcctcgcg
gaagaacacgaggccatcgaggcggatgtgacactgatcggcaaggcgctttccggcggc
ttctacccggtttctgccgtgctttcgaattcggaggtcctcggcgtgctgaagcccggc
cagcacggctctaccttcggcggcaacccgctcgcctgcgcgatcgccagggcggcactg
aaggtgctgaccgaagaaggcatgatcgagaattcggcgcggatgggcgaacgcttcatg
acggggctgacggacattcgctccaacatcatcagggaagtccgcggccgcggcctgatg
ctcgccgtggaactcgtgccggaggccggcggcgcacgcaaatattgcgaggcgctgaag
gcgcgcggcatcctcgccaaggacacccacggcgacacgatccgcatcgccccgccgctc
gtcatcaccgcgggagaggtcgactgggcgctcgagcaattcgcggcggtgctcgcttcc
acctga
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