Sinorhizobium fredii NGR234: NGR_c31160
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Entry
NGR_c31160 CDS
T00888
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NGR_c31160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c31160
Enzymes [BR:
rhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NGR_c31160
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NGR_c31160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
Zn_ribbon_6
AAA_30
Zn_ribbon_Com
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ACP26851
UniProt:
C3M9S6
LinkDB
All DBs
Position
complement(3273792..3275996)
Genome browser
AA seq
734 aa
AA seq
DB search
MTLDSTDLFGALFDRRVVPVLVPMPAPRPYSYAVPEGMAVEPGSIVQVPLGPRLVVGVVW
DGDDDGMVDSKKLKEIEKVFDCPPLTRDMRTFLDWVASYTITPPGLVARMALRAPTAFDP
EPMVEALRLTERRPERMTAARERVLATAGDGFSWTRSGLAHAAGVSSGVIDGLAAQGVFE
TVFMPPPPVVAVPDPDFAAPRLEGVQKEAAADLLAAVEDGKFSVSLIDGVTGSGKTEVYF
EAIAATLRAGKQVLILLPEIALTAGFLERFQDRFGAKPAEWHSDLAPRTREKVWRQVTTG
QVRVVAGARSALFLPFEELGLIIVDEEHDPAYKQEDRVFYNARDMAVVRGRISAFPVVLV
SATPSVESRVNGEVGRYRPIHLPTRFGDAALPHLGVVDMRRHPPERGGFLSPVLLNQVGK
AIGRGQQALLFLNRRGYAPLTLCRVCGHRFQCPDCSSWLVEHRFRGQIQCHHCGYSERTP
EACPECGTLDHLVACGPGVERIAEEVERHFPEARTIVLSSDLMGVKRLRLELEAIARGEA
DIVIGTQLVAKGHNFPMMTLVGIVDADLGLANGDPRAAERTFQLLSQVTGRAGRTGLKSL
GLLQTYQPQHPVMQAIVSGDSDAFYEREIHERERAVLPPFGRLASIIVSADTRSDAEGHA
RGLRNAAPRVDGISVLGPAEAPLALIRGRHRFRLLVHGRRNSDMQSFLKAMISSGPKERG
SVSVQLDVDPQSFL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgattcaaccgatttattcggcgctctcttcgaccgccgcgtggtgcccgtc
ctggtgccgatgccggcgccgaggccctattcctatgcggtgccggaggggatggcggtc
gagccgggctcgatcgtgcaggtgccgctcgggccgcggctcgtcgtcggcgtcgtctgg
gacggcgacgacgatggcatggtcgattcgaagaagctgaaggagatcgagaaggtcttc
gactgcccgccgctcacccgcgacatgcgcacctttctcgactgggtggcgtcctacacc
attacgccccccggcctggtggcccgcatggcgctccgcgcaccgaccgccttcgatccc
gagccgatggtcgaggccttgcggctgaccgaacgacgcccggaacggatgaccgccgcc
cgcgagcgggtccttgcgacggcgggcgacggcttttcctggacccgttccggccttgcc
catgcggccggcgtctcttccggggtgatcgacggacttgccgcgcaaggcgtgttcgag
acggtgttcatgccgccgccgccggtggtcgccgtgcccgatccggatttcgccgcgccg
cgcctcgagggggtgcagaaggaggcggccgccgatctgctcgccgccgtcgaggacgga
aagttctccgtctcgctgatcgacggcgtcacgggctcgggcaagaccgaagtttatttc
gaggcgatcgcagcaacgctcagggccggcaagcaggtcttgatcctgctgccggagatc
gcgctcaccgcaggcttcttggagcgtttccaggaccgttttggtgcgaagccggcggaa
tggcattccgatcttgccccgcgtacgcgtgagaaagtgtggcggcaggtgacgaccggc
caggtgcgtgtcgttgccggcgcccgctcggcgctgttcctgcccttcgaggagctcggc
ctgatcatcgtcgacgaggagcacgaccccgcctacaagcaggaggaccgggtgttctac
aatgcgcgcgacatggcggtggtgcgcggccggatcagcgcctttccggtcgtgctggtt
tccgcaacgccttccgtcgagagccgggtcaacggcgaggtcggccgctaccggccgatc
cacctgccgacccgcttcggcgatgcggcgctgccgcatctcggcgtcgtcgacatgcgt
cgtcatccgccggagcgcggcggattcctctcgccggtgctcttgaaccaggtcggcaag
gcgatcggccgcggtcagcaggcgctcctgttcctgaaccgccgcggctatgcgccgttg
acgctctgccgcgtctgcgggcaccgcttccagtgcccggactgctcgagctggctcgtc
gagcaccgctttcgcggccagatccagtgccaccattgcggctattcggagcgcaccccg
gaagcctgcccggaatgcggcacgctggaccacctggtcgcctgcggaccgggggtcgaa
cgcatcgccgaggaggtcgagcggcattttccggaagcccgcaccatcgtgctctcctcc
gacctgatgggcgtcaagcggctgaggctggaactcgaggcgatcgcccgcggcgaggcg
gacatcgtcatcggcacgcagctcgtcgccaagggacacaattttccgatgatgacgctg
gtcggcatcgtcgatgccgatctcggccttgccaatggcgatccgcgcgccgccgagcga
accttccaactgctgtcgcaggtgacgggacgcgccgggcggaccggtctcaagagcctc
ggcctgctgcagacctatcagccgcagcatccggtgatgcaggcgatcgtatcgggcgat
tcggatgccttctatgaacgcgagatccacgagcgggaacgcgcggtgctgccgcccttc
ggccggcttgcctcgattatcgtctcggccgacacgcgaagcgatgccgaggggcatgca
cgcggcctgcgcaatgccgcgccacgggtcgacggcatttcggttttgggtccggccgag
gcgccgctcgcgctgatccgcggccggcatcggtttcgcctgctcgtccacggacgacgc
aacagcgacatgcaatctttcctgaaggcgatgatttcctccgggccgaaggagcgcggt
tcggtcagcgtccagctcgacgtcgatccgcagagttttctgtga
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