Sinorhizobium fredii NGR234: NGR_c32870
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Entry
NGR_c32870 CDS
T00888
Name
(GenBank) putative transcriptional regulator, LuxR family
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02020
Two-component system
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NGR_c32870
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c32870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhi03000
]
NGR_c32870
Transcription factors [BR:
rhi03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
NGR_c32870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ACP27017
UniProt:
C3MAM4
LinkDB
All DBs
Position
complement(3450039..3450779)
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AA seq
246 aa
AA seq
DB search
MNITLLVQFLALLEEMKTREEILPEFERLLDRCGFDFYGVVRQPKPHENPLRLLLAGRWP
ESWPQIYIRKKYVVIDPTIRYLGHAQRGFRWRDTLVAFRSDPHRKRMESMMVEARNHGLF
DGDIFPVHGRRGLMGNLTVGGRVVDLSPVELSLFDAIAKRLFWKLLELTDPEIMAELVSR
VEVQMTRREMEALNYLADGMTSNDIGKVLDISSHTVDWYMNGIQEKLKAKNRHHAVAIAF
RLGLIS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaatataacgttgctcgtacagtttctggcgcttctcgaggagatgaagacacgcgag
gaaatcctgccggagttcgaacggctgctcgatcgctgcggtttcgatttctacggcgtg
gtgcgccagcccaaaccgcacgagaacccgctgaggctgctgctcgccgggcgttggccc
gagagctggccgcagatctacatccgcaagaaatacgtcgtcatcgatccgacgatccgc
tatctcggccacgcccagcgcggcttccgctggcgcgacacgctggtcgccttccgctcg
gacccgcaccgcaagcgcatggaaagcatgatggtcgaggcgcgcaatcacgggcttttc
gacggcgatatctttccggtgcacggccggcgcgggctgatgggcaacttgaccgtcggc
ggccgggtggtcgatttgagcccggtggagctgagcctcttcgatgcgattgccaaacgg
ctgttctggaagctgctcgagctcaccgatccggaaatcatggccgagctcgtctcgcgc
gtcgaagtccagatgacgcggcgcgaaatggaggcgctcaactatctcgccgacggcatg
acctcaaacgacatcggcaaggtgctcgacatttcgagccacaccgtcgactggtacatg
aacggcatccaggagaagctgaaggcaaagaaccggcatcatgccgtcgccatcgccttc
cggctcggcctcatctcctaa
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