Sinorhizobium fredii NGR234: NGR_c33840
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Entry
NGR_c33840 CDS
T00888
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rhi
Sinorhizobium fredii NGR234
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c33840
Enzymes [BR:
rhi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NGR_c33840
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NGR_c33840
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
ACP27114
UniProt:
C3MBA5
LinkDB
All DBs
Position
complement(3576209..3579388)
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AA seq
1059 aa
AA seq
DB search
MPGRASNVFTIPAGLPFLKTLAEKLLGGVLTPDFQYESADPLALAGVTIFVPTRRAARVL
RSEFVDLLGGRSAILPVIRPLGETDDDSGFFDAEMPAILDLAPPLSGTQRLIELGRLILA
WRNRLPQVVLDIHAESPLIAPASPADAIWLARNLAELIDAIETEELDWDALDGLDGGEHA
LWWQLTLAFLKIARIYWPERLDELKHSSPARHRNAMLKAETQRIAAGKVSGPIIIAGSTG
SIPATAALIAAVKTLPNGTIVLPGLDLVMSETEWELIAEVAASGPPARGPASRTHPQYGF
HRFLKRMRIERLDVPVLGSLDDDLGYRGAVLSRALLPAEATDGWTEARGGFEPEKLLAAF
ADVALIEAANEREEAAAIAIALRLALEGDEESQAALITPDRGLARRVGAELARFGIEADD
SAGVPLSATSAGALARLLIEATLRPDDPVALVALLKHPLARFGQTAVDTRRAADVLELLA
LRGGTDLSDISGLEAVLDKALARQRTERHPRPWRRGIDQGDIARARALAGRISTAVEPLT
STNAGGSEGGRHHSMVLTLADWAERTGRALEAVAIDERGSLGELWGSEAGEALATLLRSI
IETDGQMEADGRQWCDIVVALAASEAVKPRSMRHPRVFIFGALESRLQSVDLVVLGGLNE
GTWPGQTSNDPFLSRTMKSGIGLEPPERRIGQLAHDFQMACGTRRLILSRSMRQGSAPTV
ASRWVQRLQALGGKTLTEQLKANGASYLHWMRILDGGERQPLSERPQPKPPVELQPRKYS
FSEVTKLRRDPYSIYARRILRLEPIDSFNRDPGAAERGLLYHRIVDRFVKGGFDPASGDG
EEAMVRLIREAFDEEQLPAHIDTIWRPRFEAVARAFLSWERERRHTIVRSFTEAPAAMDV
GVSDIRLTGIADRLDRLANGTVDIIDYKTGSSPSAKEARALLDPQLALEAAALKAGAFGT
IGPARPHALRYVRLKPGSRFAVDTVNNENSKSRETKTAEQLAEESLAELRKLLAALTSGK
YGFASRLIVQKERDYGGEYDHLARVAEWATADGEDDDEE
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggacgagcctccaacgtcttcacgattcctgccggcctgcctttcctaaagacg
ctggcggaaaaactcctgggcggcgtgctgacgccggacttccaatacgaatcggccgat
ccgctggcgctcgccggcgtgacgatcttcgtgccgacgcggcgtgcggcccgcgtcctg
cgctcggaattcgtcgacctgctcggcggccgctcggcgatcctgccggtgatccgcccg
cttggcgagacggacgatgacagcggcttcttcgacgccgagatgccggcgatcctcgat
ctggcgccgccgctttccggcacccaacggctgatcgagctcggccggctgatccttgcc
tggcgcaaccgcctgccgcaggtggtcctcgacattcatgccgaaagcccgctgatcgcg
ccggcgagcccggccgatgccatctggctggcgcgcaatctcgccgagctgatagacgcg
atcgagacggaggagctcgactgggacgcgctcgacgggcttgatggcggcgagcatgcg
ctctggtggcaattgacactggccttcctgaagattgcccggatctattggccggaacgg
ctcgacgaactcaagcattcctcgccggcgcggcatcgcaacgcgatgctcaaagccgaa
acacagcggattgccgccggcaaggtaagcgggccaatcatcatcgccggctcgaccggc
tcgatccccgcgaccgccgccctgatagccgcggtgaagacgctgccgaacggcacgatc
gtgcttcccggcctggacctcgtgatgagcgagacggaatgggagcttatcgcagaggtc
gccgcttcaggcccgcctgcaagaggcccggcaagccgcacccatccgcagtatggcttc
caccgctttctgaagcgcatgcgcatcgaacgtctcgacgtgccggttttgggatcgctc
gacgatgacctcggttatcgcggcgcggtgctttcgcgggcgctgctcccggccgaggcc
actgacggctggactgaggcgcgcggcggtttcgagccggagaagctccttgcggccttc
gccgacgtggcgctgatcgaggcggcgaacgagcgcgaggaggcggccgcgatcgccatt
gcgctgcggctggcgctcgaaggcgacgaagagagccaggcggcgctgatcactccggat
cggggactggcgcggcgcgtcggggcggaactcgcccggttcggcatcgaagccgatgac
tccgccggcgtgccgctctcggcgacgtcggctggcgcgctggcgcggctgctgatcgag
gcgaccctcagacccgacgatccggtggccctggtggcgctgctcaagcatccgctcgcc
cgcttcggccagacggccgtagatacccggcgggcggccgacgtgctggagcttctggcg
ctgcgcggcggcaccgacctttccgatatctccggcctcgaagccgtgctcgacaaggca
ctcgccaggcagcgcaccgagcggcacccgagaccttggcgccgcggcatcgatcaaggc
gatatcgcccgcgcacgggcacttgcggggcgcatttcaacggccgtcgagccgctgacc
agcaccaacgccggcgggtcggaaggtggccgccatcactccatggtcctgaccctcgcc
gactgggcggaacgtaccggtcgggcgctggaggctgtcgccatcgacgagcgcggcagc
ctcggcgagctttgggggtcggaagccggcgaagcattggcaacgcttctgcgaagcatc
atcgagaccgacgggcagatggaggccgacggacggcaatggtgcgatatcgtcgtggcg
cttgccgccagcgaagcggtcaaaccgcgatcgatgcgacacccgcgcgtcttcatcttc
ggggcgctggaatcgcgcctgcaaagcgtcgatctcgtcgtgctgggcggcctgaacgag
ggcacctggccgggacagacctccaacgaccctttcctgtcgcggacgatgaagtcgggc
atcggcctcgaaccgccggagcggcgcatcggtcagctcgcccatgatttccagatggcc
tgcggaacgcgccgtctgattctttcccgctccatgcgccagggctccgcgccgaccgtc
gcctcgcgatgggtgcagcggctgcaggcgcttggcggcaaaactttgaccgaacagctc
aaggcgaatggcgccagctatcttcactggatgcgcatcctagacggcggcgagcgccag
ccgctcagcgagcggccgcagccgaagccgccagtcgagttgcagccacgcaaatactcc
ttcagcgaggtgaccaagcttcgccgcgacccctattccatctatgcgcgccgcatcttg
cggctggagccgatcgattccttcaaccgtgatccgggcgccgccgaacgcggcctgctc
taccaccggatcgtcgaccgcttcgtcaagggcggtttcgaccccgcctccggcgatggg
gaagaggcgatggtgcgactgatccgggaagccttcgacgaggagcaactcccggctcac
atcgacacgatctggcggccgcgcttcgaggcggtggcaagggcgtttctttcctgggag
cgggagcgccggcacacgatcgtcaggtccttcaccgaggctcctgccgcgatggatgtc
ggtgtctcggacatcagactgaccgggatcgccgatcggctcgaccggctggcgaacggt
acggtcgacatcatcgattacaagacgggctccagcccttcggcgaaggaagcgcgggcg
ctgctcgacccgcagctcgcgctcgaggcggcggcgctcaaggcgggcgccttcggcacg
atcgggccggcccggccgcatgcgctgcgctatgttcgcctcaagcccggcagccgcttt
gccgtcgacacggtcaacaacgagaacagcaagtcgagggagaccaaaaccgccgagcaa
ctggcagaggaatcgcttgccgaactgaggaagctgctcgccgcgctgaccagcggaaaa
tacggcttcgcctcgcgcctgatcgtccagaaggaacgggactacggcggtgaatacgac
cacctggcacgcgtcgcggaatgggcgacggccgacggggaggacgacgatgaggaatga
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