Sinorhizobium fredii NGR234: NGR_c35150
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Entry
NGR_c35150 CDS
T00888
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03030
DNA replication
rhi03410
Base excision repair
rhi03420
Nucleotide excision repair
rhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGR_c35150 (polA)
03410 Base excision repair
NGR_c35150 (polA)
03420 Nucleotide excision repair
NGR_c35150 (polA)
03440 Homologous recombination
NGR_c35150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhi03032
]
NGR_c35150 (polA)
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c35150 (polA)
Enzymes [BR:
rhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NGR_c35150 (polA)
DNA replication proteins [BR:
rhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NGR_c35150 (polA)
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NGR_c35150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NGR_c35150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
PUA_4
IMS_HHH
HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
ACP27239
UniProt:
C3MC14
LinkDB
All DBs
Position
3727551..3730673
Genome browser
AA seq
1040 aa
AA seq
DB search
MLGARSGSRLGNGHRGQTLQAKPRWTFVSPRAIHGRMKNGDHLFLVDGSGFIFRAFHAIP
PLNRKSDGLPVNAVAGFCNMLWKLLTDARDTSVGVTPTHFAVIFDYSSKTFRNALYDQYK
ANRTAPPEDLIPQFGLIRHATRAFNLPCIEKEGYEADDLIATYARLAEEAGAGVTIVSSD
KDLMQLVTPNVSMYDSMKDKQIAIPDVIEKWGVPPEKMIDLQAMTGDSTDNVPGIPGIGP
KTAAQLLEEYGDLDTLLSRAGEIKQQKRREAIIANAELARLSRELVTLKKDTPLDVPLED
LRLDSQDGPKLIAFLKTMEFTTLTRRVAAATDTDAEAVEPAPVPVEWGAAAHGPDLDVGE
AAGPPPTPASSSAAPPRGNAAKAAVSFLTGKGDADATGATPQGLAQARAEHFAKAPFDHS
AYATIRDLATLDRWIAEAREAGLFGFDTETTSLDPMRADLCGVSLAIADYSNDPMGGTIR
AAYVPLIHKNGVGDLLGGGLVENQVPMREALSRLKNLLEDPSVLKVAQNLKYDYLVMKRH
GIAMQSFDDTMLMSYVVDAGNGMHGMDSLSERWLGHTPIPYKDIAGTGKASVSFDFVDID
KATTYAAEDADVTLRLWHVLKPRLAAKGLTRVYERLERPLIAVLAHMEERGITVDRQILS
RLSGELAQGAAALEDEIYRLAGETFTIGSPKQLGDILFGKMGLPGGSKTKTGQWSTSASV
LEDLAAVGHELPRKIVDWRQLTKLKSTYTDALPGYVHPETKRVHTGYALAATTTGRLSSS
EPNLQNIPVRTAEGRRIRTAFIATPGHKLVSADYSQIELRVLAHVADIPQLRQAFADGVD
IHAMTASEMFGVPVEGMPSEIRRRAKAINFGIIYGISAFGLANQLSIERSEAGDYIKRYF
ERFPGIRDYMENTKAFAREHGYVETIFGRRAHYPDIRSSNPSMRAFNERASINAPIQGSA
ADIIRRAMVKMEPALDEAKLAARMLLQVHDELIFEVEEGEIERTLPVIVSVMENAAMPAL
DMRVPLKVDARAAQNWDEAH
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgcgaggagcggaagccggcttggaaatgggcatcgcggccaaactttgcaa
gcaaaaccgcgatggacctttgtctccccccgcgctatccatggccgcatgaaaaacggt
gatcatctcttcctcgtcgacggctcgggcttcatcttccgggcgttccacgccatcccg
ccgctcaaccgcaagtcggacggacttccggtcaatgcggtggccggcttctgcaacatg
ctctggaagcttctgaccgatgcgcgcgacacttcggtcggggtgacgccgacgcatttc
gcggtgatcttcgactattcctcgaagaccttccgcaatgcgctctacgaccagtacaaa
gcgaaccgcacggcgccgccggaagacctgatcccgcaattcgggctgatccgccacgcc
acccgcgccttcaacctgccctgtatcgagaaggagggctatgaggccgacgacctgatc
gccacctatgcgcggctggccgaggaggcgggcgccggcgtcaccatcgtttcgtccgac
aaggacctcatgcaattggtcacccccaatgtgtcgatgtacgacagcatgaaggacaag
cagatcgccattcccgacgtgatcgagaaatggggcgtgccgcccgagaagatgatcgat
ctccaggcgatgaccggcgattcgaccgacaacgtgccgggcattccgggcatcggcccg
aagaccgcggcgcagctcctcgaagagtatggcgacctcgacacgctgctttcgcgggcc
ggcgagatcaagcagcagaagcggcgcgaggcgatcatcgccaatgccgagctggcgcgc
ctgtcgcgcgagctcgtcaccctgaagaaggacacgccgctcgacgtgccgctcgaggat
ctgcggctcgattcgcaggatggtccgaagctcatcgccttcctgaagacgatggaattc
accacgctgacgcgccgcgtcgcggcggcgaccgatacggatgcggaagcggtcgagccg
gcgcctgtgccggtcgaatggggtgccgccgcgcacgggccggatctcgacgtcggggag
gccgccggaccgccgccgacaccggcctcgtcgagtgccgcgccgccgcgcggcaatgcc
gccaaggcggcggtttccttcctgaccggcaagggcgacgcggatgccaccggcgccacg
ccgcaggggctggcgcaggcgcgcgccgagcatttcgccaaggcaccgttcgaccattcg
gcctatgcgacgatccgcgatctcgcgaccctcgaccgctggatcgcggaggcgcgcgaa
gcgggcctcttcggcttcgatacggagacgacgtccctcgatccgatgcgggccgacctc
tgcggcgtctcgctggcgatcgccgactacagcaacgatcccatgggcggcaccatccgc
gccgcctatgtgccgctgattcacaagaacggcgtcggcgacctcctgggtggcggcctg
gtggaaaaccaggtgccgatgcgcgaggcgctaagccggctaaagaacctgcttgaagac
ccgtccgtgctgaaggtcgcccagaacctgaaatacgactatctcgtcatgaagcggcac
ggcattgccatgcagagcttcgacgacacgatgctgatgtcctatgtggtcgatgccggc
aacggcatgcacggcatggattcgctctcggaacgttggctcggccacacgccgatcccc
tacaaggacattgccggcaccggcaaggcgtcggtgagcttcgacttcgtcgacatcgac
aaggcgaccacctatgcggccgaggacgccgacgtcacgctccgcctctggcacgtcctg
aagccgcggcttgccgccaagggtctgacgcgcgtttatgaacggctcgaaaggccgctg
atcgccgtgctcgcgcatatggaggagcgcggcatcaccgtcgaccggcagattctctcg
cgcctctccggcgagctggcgcagggggccgcggccctcgaggacgagatctatcggctg
gccggcgagaccttcaccatcggctcgccgaagcagctcggcgatattctgttcggtaag
atgggccttcccggcggatcgaagacgaagaccggccaatggtcgacctccgcttcggtg
ctcgaggatctcgccgccgtcggccacgagctgccgcgcaagatcgtcgactggcggcag
ctcaccaagctcaaatccacctatacggacgcgctgccgggctacgttcacccggagacg
aaacgcgttcacaccggctacgcgcttgccgcgacgacgacggggcggctttcctcgtcc
gagccgaacctgcagaacattccggtccgcaccgccgagggccgcaggatccgcaccgcc
ttcatcgcgacgcccggccacaagctggtctcggccgactacagccagatcgagctcagg
gtgctggcccatgtggcggacatcccgcagcttcgccaggctttcgccgacggcgtcgac
attcacgcgatgaccgcgtcggaaatgttcggcgttccggtcgaaggaatgccgagcgag
atccgccgccgcgccaaggcgatcaatttcggcatcatctacggcatctccgccttcggc
cttgccaaccagctgtcgatcgaacgctcggaagccggcgactatatcaagcgctatttc
gagcgcttccccggcattcgcgactacatggaaaacaccaaggccttcgcccgcgagcat
ggctatgtcgagacgatcttcggccgccgcgcccactacccggatatccgctcctccaat
ccgtcgatgcgggctttcaacgagcgtgcctcgatcaacgcgccgatccagggctcggcc
gccgacatcatccgccgcgccatggtcaagatggaacccgcgctggatgaggcgaagctc
gccgcccgcatgctgctgcaggtgcacgatgaactgatcttcgaggtcgaggaaggcgag
atcgagcgcacccttccggtgatcgtttcggtgatggaaaacgcggcaatgccggcgctc
gacatgcgcgtgccgctgaaggtcgatgcgcgtgccgcgcagaactgggacgaggcgcac
taa
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