Sinorhizobium fredii NGR234: NGR_c35580
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Entry
NGR_c35580 CDS
T00888
Symbol
dnaX
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi03030
DNA replication
rhi03430
Mismatch repair
rhi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NGR_c35580 (dnaX)
03430 Mismatch repair
NGR_c35580 (dnaX)
03440 Homologous recombination
NGR_c35580 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhi03032
]
NGR_c35580 (dnaX)
03400 DNA repair and recombination proteins [BR:
rhi03400
]
NGR_c35580 (dnaX)
Enzymes [BR:
rhi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NGR_c35580 (dnaX)
DNA replication proteins [BR:
rhi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NGR_c35580 (dnaX)
DNA repair and recombination proteins [BR:
rhi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NGR_c35580 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
AAA_14
AAA_24
AAA_19
RuvB_N
AAA_18
SKI
TsaE
AAA_assoc_2
SRP54
DUF815
Rad17
CbiA
AAA_28
RNA_helicase
nSTAND3
ABC_tran
AAA_2
Motif
Other DBs
NCBI-ProteinID:
ACP27281
UniProt:
C3MC56
LinkDB
All DBs
Position
3772663..3774600
Genome browser
AA seq
645 aa
AA seq
DB search
MPASHLLRPVGTRVRTAAGSMSDEAPISSPVSTVEKPAAYRVLARKYRPKDFSDLMVGQE
PMVRTLTNAFETGRIAQAYMLTGVRGVGKTTTARILARALNYKTAEIDKPTIDLRIPGEH
CQAIMDGRHVDVIEMDAASHTGIDDIREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNG
LLKTLEEPPEHVKFIFATTEIRKVPITVLSRCQRFDLRRISASDLVGLFSTILNKEAVRF
EPEALAMVARAAEGSARDGLSLLDQAIAHGGGSVEMETVRSMLGLADRARIVDLFEHIVK
GDAAAALGEFAAQYEAGANPTVVLTDLADFTHLVTRMKYVPEAANDQSFSEIERRRGAEF
AGSVAVTTLSRIWQMLLKGIPEAESSARPAGAAEMVLIRLAHAAHLPSPEEAARRLLELS
GGEAGDGRPAPARTSGNTQAQAGQPVQARSVEAAPVQRPSANGATMLRAVPDVAAQPITV
GRIEDRPAQAPAAKAEPKVPVNSVGDIADLCAKNRDIKLKTLVRGFLRLVHIEPGRLDVN
LSDDAPKTLLNELAVKLKEWTGIHWVVSYSREPGEPTLVEAEQRAQEQRVNDARQDPDVA
AILARFPGARITDVRIRAAEEEVEDLALAAAESADGDIVPGDDIE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
gtgccagcctcccaccttctccgtcctgtcgggacaagagttcgaacagcggcagggtcg
atgagcgacgaagcgcccatttcatccccagtttcaaccgtcgagaaaccggccgcctac
cgcgtcctggcgcgcaaatatcgcccaaaggatttctccgatctgatggtcggccaggag
ccgatggtgcgcacgctcaccaacgccttcgagaccggccgcatcgcccaggcctatatg
ctgaccggcgtgcgcggcgtcggcaagacgacgacggcgcgcatcctggcgcgggcgctg
aactataagaccgccgagatcgacaagccgacgatcgacctgcgcatccccggcgagcac
tgccaggcgatcatggacggccgccatgtcgacgtcatcgagatggacgccgcctcgcat
accggtatcgacgacatccgcgagatcatcgagcaggtgcgctaccggcccgtttcggcg
cgctacaaggtctatatcatcgacgaagtgcacatgctctcgacccaggccttcaacggc
ctgttgaagacgctcgaggagccgccggagcatgtgaagttcatcttcgcgacgaccgag
atccgcaaggttccgatcactgtcctgtcgcgctgccagcgcttcgacttgcggcgcatc
agtgcctccgacctggtcgggctgttctccaccatcctcaacaaggaggccgtgcgtttc
gagccggaagcgctggcgatggtggcgcgtgccgcggaaggctcggcgcgcgacggcctg
tcgctgctcgaccaggcgatcgcccatggcggcggttcggtcgagatggagacggtgcgc
tcgatgctcggtcttgccgaccgggcccgcatcgtcgatctcttcgaacacatcgtcaag
ggcgatgcggccgcggcgctcggcgaattcgcggcacaatacgaggcgggcgccaacccg
acggtcgtcttgaccgatcttgccgacttcacccatctggtgacgcggatgaaatatgtg
cccgaggcggcgaacgaccagtccttcagcgagatcgaacgccggcgcggcgccgagttc
gccggcagcgtcgcggtcaccaccctgtcgcgtatctggcagatgctcctgaagggcatt
cccgaggcggaaagctcggcgcgcccggccggcgctgccgagatggtgctgatccggctc
gcccatgccgcccatcttccttcgccggaagaggcggcgcggcgccttctcgagctttcg
ggcggcgaggccggcgacgggcgcccggcgccggcccgcactagcggcaatacccaggct
caggccggtcagccggtccaggcccgctccgtcgaggctgcacccgtccagcgcccgtcc
gcgaatggcgccaccatgctgcgggccgtgcccgatgtggcggcccagccgatcactgtc
gggcggatcgaggacaggccggcgcaggcacctgccgcgaaggcggagcccaaggttccg
gtcaattcggtgggcgacatcgccgatctctgcgcgaagaaccgcgacatcaagctgaag
acgctggtgcgcggcttcctgcggctcgtgcatatcgagcccggcaggctcgacgtcaac
ctttccgacgatgcgccgaagacgctgctcaacgagctggccgtcaagctcaaggaatgg
accggaatccactgggtcgtcagctacagccgcgagccgggcgaaccgacgctcgtcgag
gccgagcagcgcgcccaggagcagcgcgtcaacgacgcccgtcaggatccggacgtcgcc
gcgatcctggcgcgctttccgggcgcgagaatcaccgacgtgcgcattcgcgccgcggag
gaggaggtcgaagacctcgctctggcggcggccgaatccgccgatggcgacatcgtcccc
ggcgacgacatcgagtag
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