Rhizobium sp. ACO-34A: ACO34A_01055
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Entry
ACO34A_01055 CDS
T11040
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rhia Rhizobium sp. ACO-34A
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhia03016
]
ACO34A_01055
Enzymes [BR:
rhia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACO34A_01055
Transfer RNA biogenesis [BR:
rhia03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACO34A_01055
Prokaryotic type
ACO34A_01055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ATN32400
LinkDB
All DBs
Position
complement(228206..229135)
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AA seq
309 aa
AA seq
DB search
MSKPRKPKGRPVSGWLILDKPVDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERSTDDLEGEVTQSSDARPTEEAIRALLPSYTGVI
SQVPPQFSAIKIAGERAYDLARDGETVEIPSREVKVFRLTLIKCEADRAWFEVECGKGTY
VRSLARDFGRELGCYGHISELRRSFVAPFTEETMVPLAELVALEKIEDRDERLAALDAFL
IDTGEALSGLPHIAITEDQAHRLRMGNPILLRGRNAPVSEADAFATAGGKLVAIGEIGEG
EFRPRRVFT
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccgcgtaaacccaagggccggccggtttccggctggctgatcctcgacaag
cctgtcgatttcggctcgaccgaagccgtttccaagatcaagtggctgttcaatgcccag
aaggccggacatgcaggcacactcgatccgctcgcttccggcatgctgccgatcgcgctc
ggcgatgcgaccaagaccgttccctatgtgatggacggccgcaagatctacgaattcacc
gtcacctggggtgaagagcgctcgaccgacgatctcgagggcgaggtcacccagtcttcc
gacgctcgtccgaccgaagaagcgatccgcgcactgctgccgagctataccggcgtgatt
tcgcaggttccaccgcagttttccgcgatcaagatcgccggcgagcgggcctatgacctt
gcccgcgacggcgagacggtggagatcccctcgcgcgaagtgaaagtcttccgcctgacg
ttgatcaagtgcgaagcggaccgcgcctggttcgaggtcgaatgcggcaagggcacctat
gtgcgctcgcttgcccgcgatttcggccgggaactcggctgctacggccatatctcggag
ctgcgtcgcagcttcgttgctcccttcaccgaggaaaccatggttccgcttgccgaactc
gtggcgcttgagaagatcgaggaccgcgacgagcggctggcagccctcgacgccttcctg
atcgataccggcgaggcactgtcggggcttccccatatcgccatcacggaagaccaggcg
caccggctgcgcatgggcaatccgatcctgctccggggccgcaacgcgccggtcagcgag
gccgatgccttcgccaccgccggtggcaagctggtggcgatcggcgagatcggtgagggc
gaattccgcccgcgccgcgttttcacgtga
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