Rhizobium sp. ACO-34A: ACO34A_09175
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Entry
ACO34A_09175 CDS
T11040
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rhia Rhizobium sp. ACO-34A
Pathway
rhia03030
DNA replication
rhia03430
Mismatch repair
rhia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACO34A_09175
03430 Mismatch repair
ACO34A_09175
03440 Homologous recombination
ACO34A_09175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhia03032
]
ACO34A_09175
03400 DNA repair and recombination proteins [BR:
rhia03400
]
ACO34A_09175
Enzymes [BR:
rhia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACO34A_09175
DNA replication proteins [BR:
rhia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACO34A_09175
DNA repair and recombination proteins [BR:
rhia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACO34A_09175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
McdB_C
DUF655
HROB
Motif
Other DBs
NCBI-ProteinID:
ATN33979
LinkDB
All DBs
Position
1893052..1896534
Genome browser
AA seq
1160 aa
AA seq
DB search
MAAAEAGSGAFEGGPGFVHLRMHSAYSLLEGALPLKKILSKAVSDNQPAIAITDTNNLFV
ALEFSQKAIGDGIQPIIGCQMSIDMEDAEGEKRPGQVAAYPALVLLAADNEGAERLVDLV
SRAYLGGDSSQAVHISMSWLEERGTDGLIALTGASKGPVDQSLKEGHRPQAEARLSTLKR
LFGDRLYVELQRHGEYDRAHERRMVSLAYDHDLPLVATNEAFFPTKADYEAHDALMAVAH
NAIVSDDSRFRLTPDHYLKSRKEMCELFADLPEALENTIEIAKRCSFIVDTRAPILPRFA
GVGSNPEEAERAEAEEMRRQAVEGLDRRLAALGMAEGFEEKDYRERLEFELSIIERMKFP
GYFLIVADFIKWAKQHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPERVS
MPDFDIDFCQDRREEVIRYVQQKYGREQVAQIITFGSLQARAALRDVGRVLEMPYGQVDK
ICKLVPNNPANPTPLSKAIEEEPKLQEAAEEEPVVARLLDIAQKIEGLYRHASTHAAGIV
IGDRPLSKLVPMYRDPRSDMPVTQFNMKWVEQAGLVKFDFLGLKTLTVLKTAVDFVRRLG
VEIDLSAIPLDDKKTYEMLSRGETVGVFQVESAGMRKALIGMKPDCIEDIIALVALYRPG
PMENIPVYNARKHGEEEIESVHPTIDYLLKETQGVIVYQEQVMQIAQVLSGYSLGEADLL
RRAMGKKIKEEMDKQRARFVDGAVKNGVSKNQADVIFDLLAKFANYGFNKSHAAAYAIVS
YQTAYLKAHYPVEFLAATMTYDMANSEKLNDFRQDAGRLGIAVIPPSVQTSYRRFEVGED
RIYYALAAIKGVGDSAAEHIAEVRGDKPFASLEDFCLRIDPKQINRRVFESLISAGAFDC
FGHDRAELVNGLDRVLGYAQRAQENAVSGQSDMFGSGGASGPEKIAFPAYNAWLPSEKLL
REFQVLGFYLTAHPLDSYRSLLEKMRVQTFADFSQSVRQGATAGRLAGTVTSRQERKTRT
GNKMGIVTLSDSSGQYEAVLFSEGLNQYRDLLEAGKSLVITVQADERPEGIGLRIQTAQS
LEEKSVQMQKALRVYVRDSGPLRTVAAHLNTRGDGLVSFIVIKEDGKREIEVELTEKYRI
SPEIAAAMRAAPGVVDVELV
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcggaagccggatcgggtgcctttgagggaggtccgggctttgttcatctg
aggatgcactcggcctattcactgcttgaaggcgcattgccgctcaagaagatcctgagc
aaggccgtttccgacaatcagccggccattgcgatcacggacaccaataatctgttcgtg
gcgcttgagttttcgcagaaagccatcggggacggcattcagccgatcatcggctgccag
atgtcgatcgatatggaagacgccgagggcgagaagcgcccggggcaggttgccgcttat
cctgccctcgtcctgcttgcagccgataatgagggcgccgagcgtctcgtcgatctcgta
agccgtgcctatctcggcggggattcgagccaggcggtgcatatcagcatgtcgtggctg
gaggagcggggcacggatggcttgattgccctgacgggcgcatccaaggggccggtggac
cagtcgctcaaggaagggcatcgcccccaggcggaagcccgtctttcgacgctgaagcgc
ctgttcggagatcgtctctatgtcgagttgcagcgccatggcgagtatgatcgggcgcat
gaacgccgcatggtttcgcttgcctatgaccacgatctcccgctggtcgcgaccaacgag
gccttctttccgaccaaggccgattacgaggcccatgacgccctgatggcggttgcgcat
aacgcgatcgtctcggatgacagccgtttccgcttgaccccggatcattatctcaagagc
cgcaaggagatgtgcgagcttttcgccgatcttccggaggctctggaaaacacgatcgag
atcgcgaagcgctgctcgttcatcgtcgatacccgcgcgcctatcctgccgcgtttcgcc
ggcgtcggctccaatccggaggaggcggagagggccgaagccgaggagatgcgccgccag
gcggtcgaaggcctcgaccggcgattggcggccctcggtatggctgaggggttcgaggag
aaagactatcgtgagcgtcttgagttcgagctttcgatcatcgagcgcatgaagttcccg
ggttacttcctgatcgttgcggacttcatcaagtgggccaagcagcatgacattcccgtc
ggtcccggacgtggttcgggtgcaggttcgctggttgcctatgcgctcaccattaccgac
gtcgatccgctgcgcttttctctgctgttcgaacgcttcctcaatccggaacgcgtctcg
atgcccgacttcgacatcgacttctgccaggaccgccgcgaagaggtgatccgctatgtg
cagcagaaatacgggcgcgagcaggtggcgcagatcatcactttcggttcgctgcaggcg
cgtgcggccttgcgcgacgtcggccgtgtgctcgaaatgccctatggtcaggtcgacaag
atctgcaaactggtgccgaacaatccggcgaacccgacaccgctttccaaggcgatcgag
gaagagccgaagctgcaggaagctgcggaggaggagccggtggtggctcggcttcttgac
atagcccagaagatcgagggtctctatcgccacgcctcgactcacgctgccggtatcgtg
atcggcgaccgcccgttgtcgaagctcgtgccgatgtatcgcgatccgcgttccgacatg
ccggtcacccagttcaacatgaagtgggtcgagcaggcgggcctcgtcaagttcgacttt
cttggcctcaagaccctgacggtcttgaaaaccgcggtcgatttcgttcgccgtctcggc
gtcgagatcgatctctcggcaatcccgcttgacgacaagaagacctacgagatgctgtcg
cgtggcgagacggttggcgtgttccaggtggaaagtgctggcatgcgcaaggcgctgatc
ggcatgaagcctgactgcatcgaggacattatcgcgctcgtggcgctctatcgtcccggt
ccgatggaaaatatcccggtctacaacgcgcgcaagcacggcgaggaggagatcgagtcg
gtccatccgaccatcgattacctgctcaaggaaacccagggcgttatcgtttaccaggaa
caggtcatgcagattgcgcaggtattgtcgggctattcgctcggcgaagccgacctgctg
cgccgcgccatgggtaagaagatcaaggaggagatggacaagcagcgcgcccgtttcgtc
gatggcgccgtcaagaacggcgtgtcgaagaaccaggcggatgtcatcttcgacctcctg
gccaagttcgcgaactacggcttcaacaagtcgcatgcggccgcctacgccatcgtgtct
taccagacggcctatctcaaggcgcattatccggtggaattcctcgccgcgaccatgacc
tacgatatggccaacagcgagaagctgaacgacttccggcaggatgccggtcgtcttggt
atcgctgtcattccgccgtcggttcagacctcctatcgccgtttcgaggtgggtgaggac
cgcatctattacgctctggcggccatcaagggtgtcggcgattccgccgccgagcacatc
gccgaagtcaggggcgacaagcccttcgcttcccttgaggatttctgccttcgcatcgat
cccaagcagatcaaccgccgtgttttcgaaagcctgatttcggctggagctttcgattgc
ttcgggcatgaccgcgccgaactggtcaacggccttgaccgtgtcttgggttacgcgcag
cgtgctcaggaaaacgcagtcagcggacagtccgacatgttcggctcgggtggggcgagc
gggcccgaaaagatcgctttcccggcttacaacgcctggcttccgtcggaaaagctgctg
cgcgaattccaggtgctgggcttctacctgaccgcccatccgctcgattcctatcgttcg
ctgctggaaaagatgcgcgtgcagaccttcgccgatttctcgcagtctgtgcggcaaggg
gcgaccgcgggacgtcttgcgggcacggtaacgtcccgtcaggaacgcaagacccgcacc
ggcaacaagatgggtatcgtaaccctgtcggattcctccggtcagtatgaagccgtactg
ttctccgaaggactgaaccagtatcgcgatctgctcgaagccggaaagtcgctggtgatc
accgttcaggcggatgagcgcccggagggtatcggcctgcgcatccagacggcacagtcg
ctggaggagaagtcggtgcagatgcagaaggcgctgcgcgtctatgtgcgtgacagcggc
ccgctgagaacggtcgctgcgcatctcaatacgcgtggtgacggtctcgtctcgttcatc
gtcatcaaggaagacggcaagcgggaaatcgaggtcgagctcacggagaaataccggata
tcaccggaaatcgcggcggccatgcgagccgctccgggcgtggtggatgtcgaactggtg
tga
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