Rhizobium sp. ACO-34A: ACO34A_10320
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Entry
ACO34A_10320 CDS
T11040
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
rhia Rhizobium sp. ACO-34A
Pathway
rhia03410
Base excision repair
rhia03430
Mismatch repair
rhia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACO34A_10320
03430 Mismatch repair
ACO34A_10320
03440 Homologous recombination
ACO34A_10320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhia03400
]
ACO34A_10320
DNA repair and recombination proteins [BR:
rhia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ACO34A_10320
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ACO34A_10320
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ACO34A_10320
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ATN34198
UniProt:
A0A292E7I1
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Position
2120976..2122778
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AA seq
600 aa
AA seq
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MEEPVDPVPRAFLGVEQSVSGQRWVSRLDQAGQNRALAISQLHGLPEIVSRVLAGRGVGV
DEAPAFLDPTIRSLMPDPLRLTDCAKAGERLVKAIRDGERVAIFGDYDVDGAASSALLYR
FLHHFGVEAEIYIPDRIFEGYGPNPTAIGQLIDRGAQLIVTVDCGSTSIEALAAAADRGM
DVVVIDHHQMGHQMPACLALVNPNREDDLSGQGHLCAAGVVFLVLVATLRMLREAGHPKA
RSLDLLAWLDLVALATVCDVVPLKGLNRAYVVKGLIAARHQNNAGLAALLRVAGIGGPVT
PYHFGFLVGPRINAGGRIGDAALGSRLLTLDDAAQADEIAARLDELNRERQAMEQVMLAE
AEAEVLAEYGTGESASVIVTARDNWHPGIVGLLAARIKEKFRRPAFAIAFDPSGRGTGSG
RSINGFDMGRMVRAAVDAGLLLKGGGHAMAAGLTVERANLGRLRTFFDEASSAQVATLAA
NRSLKIDGALGASAATVALIDQLESAGPYGSGHPQPVFAIPSHRLKDSRPVGTTHVKVTL
EAQDGSRVDGIAFRAAETPLGDFLLKGRGMQVHVAGSLSADHWQGTRRVQMRILDAAKAP
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaccggtagatcccgtcccgcgcgcgtttctgggcgttgagcagtccgtttcc
gggcagcgctgggtttcccgccttgatcaggccgggcagaaccgggcgcttgcgatcagt
cagctgcatgggcttccggagatcgtttcgcgcgttcttgctggacgcggcgtgggggtg
gatgaagcgccggccttcctcgatccaaccattcgctccctcatgccggatcctttgcgt
ttgaccgactgtgcgaaagccggtgagcggttggtcaaggcgatcagggatggggagagg
gtcgccatcttcggtgactatgatgtcgacggtgccgcgtcttccgcgctgctgtatcgg
ttcctgcatcacttcggcgtcgaggccgaaatctacattccggatcgcatcttcgaaggc
tacgggccgaacccgacggcaatcggtcagttgatcgatcggggcgcccagctcatcgtc
acggtcgactgcggctccaccagcatcgaagcgctggctgctgctgccgaccgcgggatg
gatgttgtcgtgatcgaccatcaccagatggggcaccagatgccggcctgcctcgcgcta
gtcaatccgaatcgtgaggacgatctttcggggcagggacatctttgtgcggccggcgtg
gtttttctggttcttgtggccacgctgcgcatgctgcgcgaagctggccatccgaaagcg
cgctcgctcgatctcctggcttggctcgatctggttgcgctcgccaccgtctgcgatgtg
gtgcccctcaagggcctgaaccgtgcctatgtcgtgaagggcctgatcgccgcgcgccac
cagaacaatgcaggccttgcagccctgctgcgggtggctggtatcggcggcccggtgacg
ccctatcacttcggttttctggtcgggccgagaatcaatgccggcggtcgaatcggcgat
gctgcgctcggaagccgtcttctgacgcttgacgatgccgcacaggctgatgagatcgcc
gcacggctggatgagctcaatcgcgaacgccaggcgatggaacaagtgatgcttgccgaa
gcggaagcggaagtgcttgccgaatacggcaccggcgaatctgcctctgtgatcgtgacg
gcgcgggacaactggcacccgggcatcgttggattgctcgcggcacgcatcaaggagaag
ttcaggcggcccgcctttgccatcgcatttgatccttcaggcaggggcacaggttccggg
cgctcgatcaatggcttcgatatgggtcgcatggtgcgggctgccgtggatgccggcctg
ctgctcaagggtggcggccacgccatggctgccggcttgactgtcgagcgcgcgaacctc
gggcggctgcggacattcttcgacgaggcatcttccgcgcaggttgcgacgcttgctgcc
aaccgctctctcaagatcgatggagcgctaggcgcgtccgccgcgaccgtggcgctcatc
gatcagctcgaatcggctggtccttacggctcaggtcatccgcagccggtcttcgccatt
ccatcccatcgtctgaaggattcgaggcccgtcggcacgactcatgtgaaggtcacgctg
gaggcacaggacggttcccgtgtggacgggattgcctttcgtgccgccgaaaccccgctt
ggagattttctgctgaaaggtcgggggatgcaggttcacgttgcgggttctttgagcgcc
gatcactggcagggcacaaggcgcgtgcagatgcgtattctcgacgctgccaaagccccg
taa
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