Rhizobium sp. ACO-34A: ACO34A_12170
Help
Entry
ACO34A_12170 CDS
T11040
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
rhia Rhizobium sp. ACO-34A
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rhia03009
]
ACO34A_12170
Enzymes [BR:
rhia01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
ACO34A_12170
Ribosome biogenesis [BR:
rhia03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACO34A_12170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF2332
Motif
Other DBs
NCBI-ProteinID:
ATN34557
LinkDB
All DBs
Position
complement(2503149..2504144)
Genome browser
AA seq
331 aa
AA seq
DB search
MAGIEHITVDADEAGMRIDRWFKVHFPGLGFGALQKLLRSGQVRVDGGRVKTDSRVQPGQ
VVRIPPLDVDLKVKAGPIGSHDLKHSDDGALLSRMLLHEDDKVFVLNKPAGLAVQGGSGL
TRHIDKMLEAWTNKKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYWS
LVKGVPRKHEDKISTWLVKDQTDEGDRMRIAKHGEDGADHAVSFYRVIDTAAQNLAWLEM
EPYTGRTHQLRVHALHIGHPIIGDPKYFIDDPNWDFPGGIQKRLHLHARHIDIPHPSGGR
LKVTAPLPPHMVQSWNLLGFDQEDGNKGDDE
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcatcgaacacatcaccgtggacgccgatgaggcgggcatgcggatcgaccgc
tggttcaaggtgcactttccgggcctcggcttcggcgctttgcagaaactgctgcggtcc
ggacaggttcgggtcgatggcggccgcgtcaagaccgacagccgggtgcagccgggacag
gtggtgcgcattccgccgctcgacgtcgacctcaaggtgaaggccgggccgatcggatcg
catgacctcaagcattccgatgacggagcgctgctgtcgcgcatgctgctgcacgaggac
gacaaggtgttcgttctcaacaagccggcgggcctcgccgtgcagggcggttcggggctt
acccgccatatcgacaagatgctggaagcatggaccaacaagaagggcgagaagccgcgg
ctggtacatcgcctcgaccgcgatacctccggcgttctggtcgtcgcacgcacgcgcggc
gctgcccagaagctgacggcggcatttcgcgagcgcgacaccaagaagacctactggtct
ctggtgaagggggtgccgcgcaagcacgaagacaagatctcgacatggctggtcaaggat
cagaccgatgagggcgaccgtatgcggatcgccaagcatggcgaggacggcgccgaccac
gccgtttccttctatcgcgtgatcgacaccgccgcgcagaatctcgcctggctggaaatg
gaaccctataccggccgaacccatcagttgcgcgtgcatgcgctccacatcggccatccg
atcatcggcgatcccaaatatttcatcgatgatccgaactgggactttccgggcggcatt
cagaagcgtctgcatctgcatgcccgccacatcgacattccgcatccctccggcggacgg
ctgaaggtgaccgcgccgctgccgccgcacatggtgcagagctggaacctgctcggtttc
gatcaggaagacggcaacaagggcgacgacgagtga
DBGET
integrated database retrieval system
