Rhizobium sp. ACO-34A: ACO34A_13650
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Entry
ACO34A_13650 CDS
T11040
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rhia Rhizobium sp. ACO-34A
Pathway
rhia03018
RNA degradation
Brite
Enzymes [BR:
rhia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACO34A_13650
Messenger RNA biogenesis [BR:
rhia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACO34A_13650
Ribosome biogenesis [BR:
rhia03009
]
Prokaryotic type
rRNA helicases
ACO34A_13650
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
ATN34844
UniProt:
A0A292E7I0
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All DBs
Position
2801614..2803713
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AA seq
699 aa
AA seq
DB search
MTEFDGIAPPIAEALSKRGYATLTPVQQAMLDRELAGADALVSAQTGSGKTVAFGLALAP
TLLDGETRFGRASAPLALAIAPTRELALQVKRELEWLYEMTGATIASCVGGMDIRTERRA
LERGAHIVVGTPGRLRDHITRNALDLSDIRAVVLDEADEMLDLGFREDLEFILESAPDDR
RTLMFSATVPKSIADLARNYQRDAKRIATAGERKQHVDIDYRALMVVPSDKENAIINVLR
YYEARNAIVFCSTRAAVNHLTSRLHNRGFSVVALSGELSQNERTHALQAMRDGRARVCIA
TDVAARGIDLPGLELVIHADLPSNPETLLHRSGRTGRAGNKGVSALIVPMSNRRKAERLL
ENAKIAANWAKPPSADEVTRRDDERLLGDPLFLDKVTEDESGAVAELLEKHGAEQVAAAF
VRLYRSGRSAPEDLIDVTVSAERKRRERDGDDARPAHSELRPRENFGPSVWFSLSVGRRQ
NAEPRWLIPMLCRHGQISKVDIGAIKMQPEETFVELAAGSAEHFLAALGPNKTIDRGITV
QPLDGVPDFNAPPKERPFREKREFGDNKPYGEKRGFGDKKPYTDKKPYGDKKPYGDKAAG
KRRFDDDMVKADAEVWGDAPARKPEGDRDFGKKPFAKKPKAAGAGDNRTWDKPAKGDWAG
KERAGKPGKPGGKFNDRGFDNRGGSGPDGKPKRKGRPNG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatttgacggcatcgcgccgccgatcgcagaggcattgtcgaagcgcggctat
gccaccctgactccggtgcagcaggccatgctcgaccgcgagcttgccggcgccgatgcc
ctggtttcggcccagacgggttccggcaagacggtcgccttcggactggctctcgccccc
accctgctcgacggcgagacccgcttcggtcgcgcctccgcaccgctggcactcgctatt
gcaccgacgcgcgaactggcgctgcaggtcaagcgcgagctcgaatggctctatgaaatg
accggtgcgacgatcgcttcctgcgtcggcggcatggatatacgcacggaacggcgcgca
ctcgaacgcggtgcccacatcgtcgtcggcacgcccggtcgcctgcgcgaccatatcacc
cgcaacgcgctcgacctgtcggacatccgcgccgttgtgctcgacgaagccgacgagatg
ctcgacctcggcttccgtgaggatctggagttcattctcgaatcggcaccggatgatcgc
cgcacgctgatgttctcggcaaccgtgccgaagtcgatcgccgatctcgcccgcaactac
cagcgcgacgcaaaacgcatcgccactgccggcgaaaggaagcagcacgtcgatatcgac
tatcgtgcgctcatggtcgtgccgtccgacaaggaaaatgcgatcatcaacgtcctgcgt
tactacgaggcgcgtaacgccatcgtgttctgctctacccgcgcagccgtcaaccacctg
acgtcccgcctgcacaatcgcggcttctcggtcgtggcgctctccggcgaactcagccag
aacgaacgcacccacgcgcttcaggccatgcgcgacggccgcgcccgcgtctgcatcgcg
accgacgttgccgcgcgcggtatcgacctgcccggcctcgagctggtcatccatgccgac
ctcccgagcaacccggaaacccttctccaccgcagcggccgtaccggccgtgccggcaac
aagggcgtatccgcgctgatcgttccgatgagcaaccgccgcaaggcggaacgcctgctg
gaaaacgccaagatcgccgcaaactgggcgaagcccccgtcggccgatgaagttacccgc
cgcgacgacgaacgccttctcggcgatccgctgttcctcgacaaggtgactgaagacgag
agcggcgcagtcgccgagttgctcgaaaagcacggtgccgaacaggttgccgccgctttc
gtccgtctctatcgcagcggccgctcggcaccggaagacctgatcgatgtcaccgtctcc
gcggaacgcaagcgccgcgaacgggatggcgacgacgcccgccctgctcatagcgaactg
cgcccgcgcgaaaacttcggtccgagcgtgtggttctccttgtctgtcggtcgccgtcaa
aacgccgagccgcgctggctgatccccatgctctgccgccacggccagatttccaaggtc
gatatcggcgccatcaagatgcagccggaagaaaccttcgtcgaactcgcggcgggcagc
gccgaacacttcctcgcggctctcggccccaacaagaccatcgaccgcggcatcaccgtg
cagccactcgacggcgtcccggatttcaacgcccctccgaaggagcgtcccttccgcgag
aagcgcgaattcggcgacaacaaaccctacggcgaaaagcgcggcttcggtgacaagaag
ccgtatacagacaagaaaccatacggtgacaagaagccttacggtgacaaggccgccggc
aagcgccgcttcgacgacgatatggtgaaggccgacgcggaagtctggggcgatgcacct
gcccgcaagcctgaaggcgaccgcgactttggcaagaagccgttcgcgaagaagccgaag
gcagccggtgccggcgacaaccggacctgggacaagcccgccaagggcgactgggccggc
aaggaacgcgcaggcaagccgggcaagcccggcggcaagttcaacgaccgtggctttgat
aaccgcggaggcagcggcccggacggcaagccgaagaggaagggccgccccaacggctga
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