Rhizobium sp. ACO-34A: ACO34A_16180
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Entry
ACO34A_16180 CDS
T11040
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rhia Rhizobium sp. ACO-34A
Pathway
rhia03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACO34A_16180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhia03400
]
ACO34A_16180
Enzymes [BR:
rhia01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACO34A_16180
DNA repair and recombination proteins [BR:
rhia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACO34A_16180
Prokaryotic type
ACO34A_16180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ATN35342
LinkDB
All DBs
Position
complement(3353775..3354479)
Genome browser
AA seq
234 aa
AA seq
DB search
MTSSDVRLEESWKRVLGPEFASPYMQQLREFLLAEKANGKRIFPKGNEYFRALDLTPLQN
VRVVILGQDPYHGAGQAHGLCFSVRPGVRIPPSLVNIYKEMATDLGIEPARHGFLESWAR
QGVLLLNSVLTVEEARAAAHQGHGWERFTDAVIRAVNEECENVVFMLWGSYAQKKAAFVD
RQRHLVLKAPHPSPLSAHNGFFGCRHFSKANDFLKSRGLEPIDWRLPERVDVAQ
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgacttcgtcggatgtcaggctggaagagagctggaagcgggtgctggggccggagttc
gccagtccatacatgcagcagctcagggagttcctgcttgccgagaaggcgaatggcaag
cgcatcttccccaagggtaacgaatatttccgcgctctcgacctgacgccgctccagaat
gtccgggtggtcattctcggtcaggatccctatcacggcgccgggcaggctcatggcctt
tgcttcagcgttcggcccggcgttcgcattcctccgtcgctggtcaacatctacaaggaa
atggcgaccgatctcggtatcgagccggctcgtcacggcttcctcgaaagctgggcgcgg
cagggcgtgcttctgctcaacagcgtgctgacggtggaggaggcgagggccgccgcgcat
cagggccatggctgggaacgcttcaccgatgccgtcatccgggcggtcaacgaggaatgc
gaaaacgtcgtcttcatgctctggggatcctatgcgcagaagaaggctgccttcgtcgat
cgccagcgccatctggtgctgaaggcaccgcatccgtcgccgctttcggcccataacggc
ttcttcggctgccggcatttctccaaggccaacgacttcctgaaatcgcgtgggctggag
ccgatcgactggcgtcttcccgaacgtgtggacgtcgcgcaatag
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