Rhizobium sp. ACO-34A: ACO34A_18230
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Entry
ACO34A_18230 CDS
T11040
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
rhia Rhizobium sp. ACO-34A
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rhia03000
]
ACO34A_18230
Transcription factors [BR:
rhia03000
]
Prokaryotic type
Helix-turn-helix
LysR family
ACO34A_18230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
ATN35744
LinkDB
All DBs
Position
complement(3805002..3805943)
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AA seq
313 aa
AA seq
DB search
MRNVTIRQLRTIEAVCRLGKINLAAAELGLTGPALTLQIQQLERDAGVALFDRGREGMVP
TGFGLAFLEAARSVEDSLSALDESISAMKGLRTGRLRLGVVSTGKYFAPQLIAAFRKHAP
SIEINLFIGNRAEIIQKLRDHEFDIALMGRPPRDFEVRSQVFGDHPLVFIAPADHPLANV
LDISRERIAEEQFLVRERGSGTRISLEIFLSAVPRRLEELGTEMGSNETIKQAVIAGLGI
AFISAHTIEQEVKLGRLVILDVVDTPIRRQWFSVSRRDRSFNPAMQAFERFLLTEGARHL
PVVAKPYPANAFG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacgtcaccatccgccagctccgtacgatcgaagccgtctgccggctgggcaag
atcaatcttgccgcagccgaattgggtctgaccgggccagcgctcacgctgcagatccag
cagctcgagcgggacgcgggtgtagcgctcttcgaccgcggacgggagggcatggtgccg
accgggttcggtctcgcgtttctggaggcggcgcgttcggtggaggacagtctttccgcg
ctcgatgaatccatcagtgcgatgaagggcttgcgcacaggcaggctgcggctgggcgtg
gtatcgactggcaagtatttcgccccgcagctgatcgccgcctttcgaaagcacgcgcca
tcgatcgagatcaacctcttcatcggtaaccgcgccgagatcatccagaagcttcgcgac
catgagttcgacatcgccctgatggggcgtcccccgcgagatttcgaggttcgctcgcag
gtcttcggcgatcatccgctggtcttcatcgccccggccgaccatccgttggcgaatgtt
ctcgacatctcccgggagcggatcgcggaagagcagttcctcgtgcgcgagagagggtcg
ggtacgaggatatcgctcgaaatcttcctgagcgcggttccccgtcgccttgaggaactc
ggaacggaaatgggatcgaacgagacgatcaagcaggcggtcatcgccgggctcggcatt
gccttcatctcggcccataccatcgagcaggaggtcaagctcggtcggctcgtcattctc
gacgtggtggacacgccgatccgccggcaatggttcagcgtgtcgcgccgcgaccggtcc
ttcaaccctgccatgcaggctttcgaacgctttctgctgacggaaggagcacgccatctg
ccggtggtggcaaagccttatccggcaaacgctttcggctga
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