Rhizobium sp. ACO-34A: ACO34A_21405
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Entry
ACO34A_21405 CDS
T11040
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rhia Rhizobium sp. ACO-34A
Brite
KEGG Orthology (KO) [BR:
rhia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rhia03016
]
ACO34A_21405
Enzymes [BR:
rhia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
ACO34A_21405
Transfer RNA biogenesis [BR:
rhia03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
ACO34A_21405
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
ATN36350
LinkDB
All DBs
Position
complement(4509505..4510098)
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AA seq
197 aa
AA seq
DB search
MPRLFTALEIPRNAALSLSLLRGGLPGARWIDVENYHITLRFIGDVDGRTADEIVDRLDR
IDRPEFQLNLNGIGSFGSKKPHSVWAGVTQAPEMYALQAEIERICQRIGLPPDPRKFTPH
VTLARLKSSRVDDVVHYLAGRGDFHTAPFTVTRFVLLSSKESVGGGPYLTEEVFPLHEAR
AASSFASMERQPAKSML
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagattattcactgccctcgaaattccgcgcaatgcggcattaagcctctccttg
ctgcgcggtggtcttcccggtgcccgatggatcgatgtggagaactaccacatcaccctt
cgcttcatcggtgacgtggatggtcgcaccgccgacgagatcgtcgaccggctcgaccgc
atcgaccggccggaattccagctcaatctcaacggtatcgggtccttcggttcgaagaag
ccgcattcggtctgggccggtgtcacgcaggcgcccgagatgtatgccctccaggcggaa
atcgaacggatctgccagaggatcggtctcccgcccgatccacgcaaattcacgccgcat
gtgacgctggcgcgtctcaagtcatcgcgtgtcgatgacgtggttcactatcttgccggc
cgcggcgacttccatactgctcccttcaccgtcacgcgcttcgtgctgctgtcgtcgaag
gaatcggtcggtggcggtccctacctcacggaagaggtgttcccgcttcacgaagcgcgg
gcggcctcgagcttcgcgagtatggaacggcagcccgccaagagcatgctgtag
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