Rhizobium sp. AB2/73: I8E17_00065
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Entry
I8E17_00065 CDS
T10377
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib02020
Two-component system
rhib02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
I8E17_00065 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
I8E17_00065 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhib03021
]
I8E17_00065 (rpoN)
Transcription machinery [BR:
rhib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I8E17_00065 (rpoN)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
UEQ80977
LinkDB
All DBs
Position
complement(10806..12365)
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AA seq
519 aa
AA seq
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MALSANLFLRQSQSLVMTPQLMQSIQLLQMTHFELTQFIAQEVEKNPLLEFASNDEDIGS
GGDRGAGDERFETMEEAHGEDGSERNAGDLASDWYESDNTGNAHRLSDELDTNFSDVFPD
DGNPQRADAPELLSQWKSMPGGDAGEGYDLDDFVAGQVSLRDHLNEQIPFSLPAMGDRLI
AQHLVDQLDDCGYLRGELSETAERLGATLADVERVLEALQQLDPPGVFARSLSECLAIQL
RQKDRFDPAMERLIENLELLARRDFATLKRLCGVDEEDLLDMMAEIRQLNPKPGSGFETD
ISEAIMPDIVVRPSADGSWLVELNPDALPRVLVSQSYFASVSKTSQDHAFLSECLQNANW
LTRSLDQRAKTIMKVASEIVRQQDAFLLHGVDHLRPLNLKTVADAIKMHESTVSRVTSNK
YMLTPRGLFELKYFFTVSIAAVEGGDSHSAEAVRHKIRLLISNESPDAVLSDDDIVDTLK
KGGIELARRTVAKYREAMNIPSSVQRRREKRALAKVSGF
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcactatcggccaatcttttcctgcgccaaagccagagcctggtgatgacaccgcaa
ctgatgcaatccatccagttgctgcagatgacgcatttcgagctcacgcagttcatcgca
caggaagtcgaaaagaacccgctgctggaatttgcgtcaaatgacgaggatataggcagc
ggcggcgatcgcggcgccggggacgaacgcttcgagaccatggaagaagcccatggcgag
gatggctccgaacgcaatgccggcgatcttgcgagcgattggtacgagagcgacaatacc
ggcaacgcccaccggctaagcgacgagctcgacacgaatttcagtgacgtctttcccgat
gacggcaacccgcagcgcgccgatgcgccggagctgctcagccagtggaagtccatgcct
ggcggcgatgccggtgaaggctacgacctggacgatttcgtcgcaggccaggtgtcgctg
cgcgatcatctcaacgaacagattcccttctcgcttcccgccatgggcgaccggctgatc
gcccagcatctcgtcgaccagctcgacgactgtggctatctgcgtggggaactcagtgag
acggccgaacgccttggtgcgacgcttgccgacgtcgagcgcgtgctggaggccctgcag
caactcgatccgcccggcgtctttgcccgctccctcagcgaatgcttggcaatccagctc
cggcagaaggatcgcttcgatcccgccatggagcggttgatcgagaatctcgagctgctt
gcccggcgcgatttcgccacgctgaagcggctctgcggcgtcgatgaggaagacctgctc
gacatgatggcggaaatccgccagctcaacccgaagcccggcagcggtttcgaaacagac
atatcggaggcgatcatgcccgatatcgtcgtgcgaccctccgcggacggaagctggctg
gtggagctcaatcccgatgcgctgccgcgggtattggtgagccagtcctatttcgcctcc
gtctccaagaccagccaggaccatgcctttctgtcggaatgcctgcagaatgccaactgg
ttgacccgcagcttggaccagcgcgccaagacgatcatgaaggtggcaagcgagatcgtg
cggcaacaggacgcgttcctgctgcatggcgtcgaccatctgcggccgctaaacctgaaa
accgtggcggatgccatcaagatgcatgaatcgacggtcagccgcgtgacctcgaacaag
tacatgctgacgccacgcgggctgttcgagctcaaatatttcttcacggtctcgatcgcc
gccgtcgagggcggagacagccattctgcagaggccgtgcgccacaagatccgtctactg
atctcgaacgagagcccggatgcggtcctctccgacgacgatatcgtcgatacgctgaag
aagggcgggatagagcttgctcgccgcacggttgcaaagtaccgggaagccatgaacatc
ccctcctccgtgcaacggcgccgggagaagcgggctctagccaaagtttccggtttctga
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