Rhizobium sp. AB2/73: I8E17_01165
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Entry
I8E17_01165 CDS
T10377
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rhib Rhizobium sp. AB2/73
Pathway
rhib02024
Quorum sensing
rhib03060
Protein export
rhib03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rhib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
I8E17_01165 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I8E17_01165 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I8E17_01165 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rhib02044
]
I8E17_01165 (secD)
Secretion system [BR:
rhib02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
I8E17_01165 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
ACR_tran
MMPL
SecD-TM1
PilB3_N
Motif
Other DBs
NCBI-ProteinID:
UEQ81177
LinkDB
All DBs
Position
complement(219448..222003)
Genome browser
AA seq
851 aa
AA seq
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MRTSPWLVALYTVIIVIGFLIALPNALPPSVLSKIPSWLPHSQVSLGLDLRGGSYLVLEV
DEKDLTNGRLQSLQQDARRVLRDKNIQTRSIVRNGDQIVVTLSDASQSSDAVTQLQTLAN
TITSGLSAGQSDLNIKPNGATIAMSFSPAGISANVDSAVQQSLEVIRKRVDQVGVAEPTI
QRVGPNRVLVQLPGAQDPSHLRELLGSTAKMSFHLLADNVDPNNPGPGVTIMKDEQGNSY
PVLDRIELSGDRLTDARVSFDPNTHEPLVTFRFDSAGANRFAEITRENVGKPFAIVLDNK
VLSAPNIREPITGGSGQISGNFTADSATTLAALLRAGALPAKLTVIEERTVGADLGSDAI
QKGIYSGLVGFVLVAAFIFVLYGAWGILANVALLIHTVLTFSALTLVGATLTLPGIAGVV
LGIGLAVDANVLINERIREETRKGRGAFAAIDNGFKKAYSTIIDGNMTALIAAAILFYFG
SGPVRGFAVTMGLGLIISMFTSVAFVRVVMIAITRRRKLKVINIRPLIPFSPYDKHIQFM
KARFFGVTVSAILSLASVVLFIHPGLNYGVDFRGGIQMSVKTKDAADLATFREGLNTLGL
GEIALQSFGDNNSLLVRAQRQDGGEEAQTAAVTKLKAEIVKIDPSATIEGTDVIGPKVSG
ELAWAGILSVVIASLAMLFYIWYRFEWPFAVGAIVTLVLDVTKAIGFFAITGLDFNLTAI
AAILTLVGYSVNDKVVVYDRMRENMRLYKSMPLRDIIDKSINETLARSLYTNATAFLALV
PMAIWGGSAVSSFAIPMVFGILVAGASSVFIAAPILLFLGDWRRRHAKPIANDAASTDGK
SGKDNKQIPAA
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacctcaccatggctcgtggcactctatacggtgatcatcgtcattggctttctg
atcgcactgccgaacgcgctgccgccgtcggttctcagcaagatcccatcctggctgcct
cacagccaggtgtcgctcggcctcgaccttcgcggcggctcctatctcgttctcgaagtc
gacgagaaggacctgacgaacggccggctgcaatcgctgcagcaggacgcgcgccgcgtg
ctgcgcgacaagaacatccagacccgctcgatcgtccgcaatggcgaccagatcgtcgtg
acgctcagcgacgcctcgcaaagcagcgatgccgtgacgcagctgcagacgctggccaat
acgatcacgtcgggcctctcggccggccagtccgatctcaacatcaagccgaatggcgcg
acgatcgcgatgtccttctcgccggccggcatttcggccaacgtcgattccgccgttcag
cagagccttgaagtcatccgcaagcgcgtcgaccaggtgggcgttgccgagccgaccatt
cagcgcgtcggcccgaaccgcgttctcgtccagcttcccggcgcacaggatccgtcgcac
ctgcgcgagcttctcggctcgaccgcgaagatgtccttccacctgctggccgacaacgtc
gatccgaacaatcccggccccggcgtcaccatcatgaaggacgagcagggcaacagctat
ccggttctcgaccgcatcgaactgtccggcgaccgcctgacggatgcccgcgtcagcttc
gatccgaacacgcacgagccgctcgtcaccttccgcttcgacagcgccggcgccaaccgg
tttgccgaaatcacccgcgaaaatgtcggcaagcccttcgccatcgtcctcgacaacaag
gttctgagtgcgcctaatatccgcgagccgatcaccggcggctcgggccagatctccggc
aacttcaccgcagacagcgccaccacgcttgcagccttgctgcgcgccggcgccctgccg
gccaagctcaccgtcatcgaggagcgcaccgtcggcgccgaccttggtagcgacgcgatc
cagaagggcatctatagcggcctggtcggcttcgttctggttgccgccttcatcttcgtg
ctctatggcgcctgggggattctggcgaatgttgccctgctcatccacacggtcctgacc
ttctcggccctgacgcttgtcggcgccacgctgacgctgcccggcatcgccggcgtcgtc
cttggtatcggcctcgcggttgatgccaacgttctcatcaacgagcgcatccgcgaagaa
acccgcaagggccgcggcgccttcgccgccatcgataacggcttcaagaaggcttattcg
acgatcatcgacggcaacatgacggcgctgattgccgccgccatcctgttctacttcggc
tccggcccggttcgcggctttgccgtgaccatgggtctcggcctcatcatctcaatgttc
acctccgtcgccttcgtgcgtgtcgtgatgatcgccattacccgtcgccgcaagctgaag
gtgatcaacatcaggccgctgatccccttcagcccctatgacaagcacatccagttcatg
aaggcccgcttcttcggcgtcaccgtctcggcgatcctgtcgctcgcctcggtggtcctg
ttcatccatccgggcctcaactacggcgtcgacttccgcggcggtatccagatgtcggtc
aagaccaaggacgcggccgatctggcgacgttccgcgagggcctgaacacgctcggcctc
ggcgaaatcgcactgcagtccttcggcgacaataacagcctccttgtccgcgcccagcgc
caggacggcggcgaagaggcgcagacggcggcagtgaccaagctcaaagccgaaatcgtc
aagatcgacccgagcgcgaccatcgaaggcaccgatgtcatcggtccgaaggtttcgggc
gagcttgcctgggccggcatcctgtcggtcgtgatcgccagcctggcgatgctgttctac
atctggtatcgcttcgaatggccgttcgcggtcggcgccatcgtgacgctggtgctcgac
gtcaccaaggcgatcggcttcttcgcgatcaccggcctcgatttcaacctgacggccatc
gccgcgatcctgacgcttgtgggatattcggtaaacgacaaggtcgtggtctatgaccgc
atgcgcgaaaacatgcggctctacaagtcgatgccgttgcgagatatcatcgacaagtcg
atcaatgagaccctggcgcgaagcctatacaccaatgccaccgccttcctggcgctggtg
ccgatggcaatctggggcggcagcgccgtctccagcttcgcgatcccgatggtgttcggc
atcctcgttgccggtgcctcgtcggtcttcatcgcagcaccgatcctgctgttcctcggc
gattggcgccgccgtcacgccaagccgattgccaatgatgcggcatcgacagacggcaaa
tccggtaaggacaacaagcagattcctgccgcataa
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